Lapidilactobacillus dextrinicus: LH506_04700
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Entry
LH506_04700 CDS
T06302
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ldx
Lapidilactobacillus dextrinicus
Brite
KEGG Orthology (KO) [BR:
ldx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ldx03400
]
LH506_04700 (radA)
DNA repair and recombination proteins [BR:
ldx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LH506_04700 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_22
ABC_tran
Lon_C
AAA_16
AAA_14
AAA
AAA_24
NTPase_1
RecA
ATPase_2
SLFN-g3_helicase
nSTAND3
NPHP3_N
AAA_5
AAA_30
AAA_19
ABC_ATPase
AAA_31
GvpD_P-loop
RUBY_RBDX
KdpD
KTI12
DUF7129
A2L_zn_ribbon
MeaB
DZR
CbiA
MCM
Zn_ribbon_15
DUF7125
Zeta_toxin
Zn_Ribbon_1
NACHT
HypA
Motif
Other DBs
NCBI-ProteinID:
QFG46787
LinkDB
All DBs
Position
920070..921458
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AA seq
462 aa
AA seq
DB search
MAKAKTQYVCQNCGYTSPTNFGRCPNCGAWNQMVEEVVAPVNTKATPSRRQDGNSHAPQL
LNEVNMQPEPRVKTDLEELNRVLGGGIVPGSLILIGGDPGIGKSTLLLQVSGQLQKTGEK
VLYISGEESASQIKLRASRLNVKGDKLYLYPETNMATIRETIAELDPKYIIIDSVQTMNE
PELSSVVGSVSQIREITAELMKIAKNEQRTIFVVGHVTKDGAIAGPKVLEHMVDTVLYFE
GDTHHSYRILRSVKNRFGSTNEIGIFEMRTDGLQEVANPSEIFLEERLAGATGSAVVVSM
EGTRPILVEIQALLAPSMFGNAKRTSTGIDHNKVALIMAVLEKRANLMLQNQDAYLKATG
GVKLNEPAIDLATALAIASSYKDKEIAPDDCFIGEIGLTGEIRRVNRIDQRLSEAAKLGF
RRAFIPKNNLSGVKIPQGLTVIGLTTIGEAIQKVFKGAKKLS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaagcaaaaacacaatacgtttgtcaaaattgtggctacacttcaccaactaac
tttggtcgttgcccgaattgcggtgcttggaatcaaatggttgaagaagtggtggcacca
gtcaataccaaggccacacctagtcgccgtcaagatggcaacagccatgcgccacaattg
ttaaatgaagtgaacatgcagccagaaccgcgtgtcaaaaccgatttagaagaattaaat
cgcgttttaggcggtgggattgttccgggatcattgattttaatcggtggcgatccgggg
attggtaaatcgacactgttattacaggtttcggggcagttgcaaaaaactggcgaaaaa
gtattgtacatctctggtgaagaaagcgcttcgcagattaaattgcgagcatcgcgccta
aatgttaaaggtgataaactatacttatatccagaaacaaatatggcaactattcgggaa
acaattgctgaacttgatcctaagtacattatcattgattcagttcaaacaatgaacgaa
ccagaattaagctcagttgtgggtagtgtttcacagattcgtgaaatcacagccgagtta
atgaaaattgccaaaaatgaacaacgaacaatttttgtagttggacatgtgactaaggat
ggcgcaatcgctggtcctaaagttttggaacatatggtggatactgttttatatttcgaa
ggcgatacacatcacagttaccgtattttacgttcagttaagaatcgctttggttcaaca
aatgaaattggtatttttgaaatgcgcaccgatggcttacaagaagtggccaatccttct
gagattttcttagaagaacgattagctggtgccacaggttctgcagtggtggtttctatg
gaggggactcgacctattttagtcgaaattcaggcattattagcaccaagtatgtttggt
aatgccaagcgaacttctacgggaattgatcataataaagtggctttgatcatggcagtt
ttggagaagcgtgctaatttaatgctacaaaaccaagatgcttatctaaaggcaactggt
ggcgttaagttaaacgaacctgccattgatctggcaacagcattagccattgcttctagt
tataaggataaagaaattgcaccagatgattgttttatcggtgaaattggtttgactggc
gaaattcgtcgggttaatcgaattgatcaacgcttaagcgaagcagcaaagttaggtttt
agacgtgcgtttatccctaaaaacaatctgtccggtgtcaaaattcctcaaggtttaaca
gtaattggcttaacaactattggagaagcgattcaaaaagtttttaaaggtgccaaaaag
cttagttaa
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