KEGG   Lapidilactobacillus dextrinicus: LH506_04810
Entry
LH506_04810       CDS       T06302                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
ldx  Lapidilactobacillus dextrinicus
Brite
KEGG Orthology (KO) [BR:ldx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ldx03016]
    LH506_04810 (truB)
Enzymes [BR:ldx01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     LH506_04810 (truB)
Transfer RNA biogenesis [BR:ldx03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LH506_04810 (truB)
 Prokaryotic type
    LH506_04810 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 RNB
Other DBs
NCBI-ProteinID: QFG46808
LinkDB
Position
946058..946963
AA seq 301 aa
MNGVIPLFKPKGVTSAGCVYQLRKILHERRIGHTGTLDPDVDGVLPICVGQATKLVDRIQ
ASGKIYQGEITLGFATTTEDLSGEEIQRVALSQAPTAQVIDDCLAQFVGEVTQIPPMFSA
VKVNGKRLYEYARAGETVERPSRKIQVDYFKRTSDLHYHEDSKTATFTFEVGCSKGTYVR
TLATDVGKKLAIPAVMSDLRRLKSGGIRLDQTVTLEEVATAVEQNQLNQVLQPIETVLAP
LPNIELTSQQWQKVQNGGAITTDLTAPEITLTYQDHIKAIYRYQKSTLGNYVPETMLLAN
E
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaacggtgtcattcccttatttaaacctaaaggcgttaccagtgcaggctgtgtctat
caattacgcaaaattttacacgaacgacgaattggtcatactggtacgttagatcctgat
gtcgatggtgttttgccaatttgtgttggtcaagcgactaagcttgttgaccgcattcag
gctagtggcaagatttatcaaggcgaaattaccttagggtttgcaacaacaacggaagat
ttgtcaggtgaagaaattcagcgggttgccttaagccaagcgccaacagcacaggtcatt
gatgactgcctggcccaatttgttggtgaagtgacgcagattccgccgatgttttctgca
gttaaagtcaatggtaagcgactttatgaatacgcccgcgctggcgaaacggttgaacgt
ccaagccgaaaaattcaggttgattactttaaacggacttctgatcttcattaccatgaa
gatagtaagacggcaacttttacctttgaagttggttgttccaaggggacttacgtgagg
acattagcaacagatgttggtaaaaaattggcgattccagcagttatgtcagatctgcgt
cggcttaaaagtggcggtattagacttgaccagacagttactctagaagaagtagcgaca
gcggttgaacaaaatcagcttaaccaagttttacaaccaatcgaaacggttctggcaccc
ttgcctaatattgagttaacctcacaacagtggcaaaaagtccaaaatggtggggctatt
accactgatttaactgcgcccgagattaccttaacttatcaagatcatattaaggcaatt
tatcgttatcaaaaaagtactttaggtaattatgtaccggaaacaatgttactggctaac
gaatag

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