Lapidilactobacillus dextrinicus: LH506_05260
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Entry
LH506_05260 CDS
T06302
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ldx
Lapidilactobacillus dextrinicus
Brite
KEGG Orthology (KO) [BR:
ldx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ldx03400
]
LH506_05260
Enzymes [BR:
ldx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LH506_05260
DNA repair and recombination proteins [BR:
ldx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LH506_05260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QFG46891
LinkDB
All DBs
Position
1032351..1035902
Genome browser
AA seq
1183 aa
AA seq
DB search
MTMKFIVGRQQDDVAARLYQQISTDYSTSLDKQFICLVPNHIKFNSEVQILAHLADARPE
LATNGIIASSRLQILSFSRLLWYFLRDDPKYQQPQLSPAAQAMFLSNFLHDHRQELPLFF
GESRKMGFLEQLGQQLNELLQGNFSTADLQEILTKLPEQKQVPGSTLEKINELSFIFENY
QAEVAAKFMTNEQLMAYFISQTEKRDFSNFNIYLSGFSELNQQQVQLLRNFDQQGATVYL
TLYLNPDLKHQDISEQYYFHGPLKMLRQLGYPDLTTIAAENWLSCQTKRTSPALQALEDY
WIDSTNGVPANAQMDQKMKQDVQIWQADSVTSEVRGVANYIRQLVALQNYRYRDFLVLAN
NLPDYTAPIVALFKQNELPFFSDQQIPMANHPLVVFIKSLLNMTQNPLNREDLFVLLRTE
LLVPADRELSEFRQQLDWLENYALAFGIRGTTWLKTKPWTLEGPYRKQATNNIEPDAQMT
AIENLHQFIAQVFGAWQKAVKKVTTAKDFASCLYDFLNNQQIIAKLQAWEQTAIDQNDLA
LAQQPRQTYQAFINLLDDYVTIWGEQPFDLTVFTDLLNAGFNNTEFSQIPATLDAVLVSK
VGMVQEQTHKITIILGATRDNLPTQTQSNQLIDDQERRLINQYLVTANKPQQLGEATNEQ
AVEQPLRYGLIFLTPQQRLIFTYPRHSDRHAENKLSPYVARIQQHFDLPTTALTDYPQRE
SRILDFAASKQGVVGPLLLLSRQMQTQNEPLPPAWQWVKRLLEENGRQDFFKHLLASLTY
RNQPQDLTSENVQKLYGQHLFSSVSQLENFYMNPYDYFLKYGLKLRPRAEYTVDSANTGT
FFHDYLDHFVKLLTERHLKPEELTQTQLDALDQEISQTLLGKTDYQILNGPGQMHYYRRR
LSKTSAFMSQVLIEQAAHSFLRPLMTEVQFGIIEGTKGLPGLEFQLADNKQLSVRGKIDR
IDVGTAADLNYYQIIDYKSGDKKFDFTRAYHGLSLQLLTYLQTVANNYQRLSLNQAEPVG
AFYLHIADTPLKYADNLNVNQEILKKHRYKGLLIEQPQTDYLANLDPKSESTNSLLYPVK
YTKSAGYKVTNDNSGVTTDELQLLLQHNQELLIAAANEIFSGKLRIAPYKLSDQETGLQY
TDYKSIMMFDAMLPENRYHILPTLGKADVLNQLKPKKEDEPDA
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgaaattcatagtaggtcgccaacaagatgatgttgcggcaagattgtaccaa
caaatcagcaccgattattcaacatctttagacaagcaattcatttgtttagtccctaat
cacattaaatttaatagtgaagtccagattctagcacatttggcagatgctcggcccgaa
ttggcaacaaatggtattatcgccagcagtcgcttacaaattctatctttctcacggttg
ctgtggtatttcttacgtgatgatcctaaatatcagcaaccccaactatcaccagcagcg
caagcgatgtttctcagtaacttcttgcacgatcatcgccaagagttgccgctctttttt
ggtgagagtcgaaaaatgggcttcctggaacaactcggacaacaacttaatgaattatta
cagggaaacttctcaacagcggacttacaagaaattctgactaaactccctgaacaaaaa
caagtccctggctcaacacttgaaaaaattaatgaattaagctttatcttcgagaattat
caagcagaagtcgcggctaaattcatgactaatgaacagttaatggcttattttattagc
caaaccgaaaagcgcgacttttcaaactttaatatttatctttctggtttttcagaatta
aaccaacagcaagtacaattactccgtaacttcgatcaacagggggcgacggtttattta
actttgtatttaaatcccgatttaaaacatcaagatattagtgaacaatattattttcac
ggcccccttaaaatgctacgtcaactaggctatcccgacctgacgacaattgcagcggaa
aattggttaagttgccaaacaaaaagaacgtcaccagctttacaagcacttgaagattat
tggattgattcaactaatggtgtaccagcaaatgcgcaaatggatcaaaaaatgaaacaa
gatgttcaaatttggcaggcagattctgttaccagtgaagtgcgcggtgtggccaactat
attcggcaattagtcgcattacaaaattatcgttaccgggactttttagtcctggccaat
aatctaccagattatactgccccaattgtggccttgtttaagcaaaatgaattgccgttt
ttcagtgatcaacaaatacccatggccaatcatcccttggttgtctttatcaagtcatta
ttgaatatgacccagaatcctttaaaccgggaagatttatttgtgttattacggactgaa
ttactggtcccagccgatcgtgaactgtcagaatttcggcaacaactagattggttagaa
aattacgccttggcctttggtattcgcggcacaacttggctaaaaacaaaaccttggaca
cttgaaggaccttatcgcaagcaggccaccaataatattgagccagatgcccaaatgacc
gcaattgaaaatttacaccaatttatcgcacaagtttttggtgcttggcaaaaagccgtt
aaaaaagtcaccacggctaaagattttgctagctgtctatatgactttttaaacaaccag
caaattattgccaagttgcaagcttgggagcaaaccgctatcgaccaaaatgacttggcc
ttagcccaacagccacgccaaacttatcaggcttttatcaacttgctggatgattacgtg
acgatttggggtgaacaaccgtttgatctaaccgtctttactgatttattaaacgccggt
ttcaacaacactgagttttctcaaattcctgcaactttagatgcggttttagtctctaaa
gtagggatggttcaagaacaaactcataaaattacaattattctaggggcaacccgtgat
aatttgcctacgcaaactcaaagcaatcaattaattgatgatcaagaacgacgcttaatt
aatcaatacttagtgacggctaataagccccagcagctaggggaggctactaacgaacaa
gctgttgaacaacctttgcgctacggtttaattttcttaacgccgcagcaacggttaatt
tttacttatccgcgtcatagtgaccgtcacgctgaaaataaactatcgccatatgttgcc
cggattcaacaacactttgacttgccaactaccgctttaaccgactatccgcaacgcgaa
agtcgtattcttgactttgccgcatccaaacaaggtgttgttggcccattactattgtta
agtcgccaaatgcaaactcaaaatgaaccattaccaccagcttggcaatgggtgaaacga
ctattagaagaaaatggtcggcaagacttctttaagcatcttttagccagcttaacgtat
cgcaatcaaccgcaagacttaacttcagaaaacgtccaaaagttatacggtcaacattta
tttagttcggtttcgcaattagagaatttttacatgaatccttacgattatttcttaaag
tatggtcttaaattgcgaccacgtgcagaatataccgttgatagtgcgaatacagggact
ttcttccatgattatttagatcacttcgttaaattattgaccgagcgtcacctaaagcca
gaagaactaacccaaacgcagttagatgccttagatcaagaaattagccaaaccttactt
ggtaaaacggactatcaaattctcaatggtcctggccaaatgcattattaccgccgacgt
ttgagtaaaaccagtgcttttatgagccaagtcttaattgaacaagcagcgcatagtttt
ttacgtccgttaatgactgaagtgcaatttggaatcattgaggggactaaaggcctgcca
ggattagaattccagttggctgacaacaaacaactatccgtccgcggtaaaatcgatcgg
attgacgttggtacagctgctgatttgaattactatcaaatcattgattataaatcaggc
gacaagaaatttgattttactcgcgcctaccatggtttatctttacaactattaacttac
ctacaaaccgttgccaataactatcagcgcttatcgttaaaccaagccgaaccagtcggg
gctttttatttgcatattgcggacacgccgttaaaatatgccgataatttaaacgttaac
caagaaattttaaaaaagcatcgctataaagggctgctaattgaacagccgcaaacagat
tacttagctaacttagatcctaagtccgaaagtacgaattcattattatatccagtgaaa
tatacgaaatcagctggttataaagttacaaatgacaattccggggtcacaactgatgaa
ttacaactgttgttgcaacataatcaagaactgttgattgccgctgctaacgaaattttc
tctggcaaattacgaattgctccttataaattaagcgatcaagaaactggtctgcaatat
actgactataagtcaatcatgatgtttgacgcgatgctcccagaaaatcgttatcacatt
ttaccaacactaggtaaagctgatgttttaaatcaattaaaaccaaaaaaggaggacgag
cccgatgcctaa
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