Lapidilactobacillus dextrinicus: LH506_05520
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Entry
LH506_05520 CDS
T06302
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ldx
Lapidilactobacillus dextrinicus
Brite
KEGG Orthology (KO) [BR:
ldx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ldx03032
]
LH506_05520 (topA)
03400 DNA repair and recombination proteins [BR:
ldx03400
]
LH506_05520 (topA)
Enzymes [BR:
ldx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LH506_05520 (topA)
DNA replication proteins [BR:
ldx03032
]
Prokaryotic type
DNA Topoisomerases
LH506_05520 (topA)
DNA repair and recombination proteins [BR:
ldx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LH506_05520 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
QFG46941
LinkDB
All DBs
Position
complement(1100227..1102305)
Genome browser
AA seq
692 aa
AA seq
DB search
MATKNLVIVESPAKAKTIEKYLGRNYKVVASLGHVRDLPKSQMGIDIENDYEPRYISIRG
KGDVIKGLKSAAKKADHIYLAADPDREGEAIAWHVSHLLNLSPEDNNRVVFNEITKDAVK
NAFKTPRSIDMNLVDAQQARRILDRLVGYSISPILWAKVKKGLSAGRVQSIALKLVIDRE
KAINAFVPEEYWSLAAEFQKGRGKKFAANFYGFDGKKQPLADNNAVQAVLSKVDKDKPFA
VQNVTKKERKRFPAAPFTTSSLQQEANRRLNYKTRKTMMIAQQLYEGINLGGKEGTVGLI
TYMRTDSTRISSVAKHEAATYLHETLGEEYAATKLRKTKNPEGAQDAHEAIRPSSVMRTP
DSLKDVLTRDQFRLYQLIWSRFVASQMTPAVFDTVTVNLEQNGVIFRANGSQMKFAGFTK
IYQSATDESKDNRLPKLEVGDDVKLVKTDPQQHFTQPPARYTEASLVKALEENGVGRPST
YAPTIDTIQKRYYVKLNGKSFEPTELGEIVDKIIEEFFPDIVNIDFTAKLEDELDGIEAA
KENWVDVVDRYYKPFAQELDKAEKGIEKIQIKDEPAGFDCDICGAPMVIKMGRFGKFYAC
SRFPDCRNTKAIVKEIGVVCPKCGEGQVIERKSKRNRIFYGCSRFPDCDFVSWDKPVGRD
CPVDGHYLVEKKVKGGRQVICPNGDYEEQVQK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaagaatcttgtgattgtggaatccccagcaaaagccaaaacaattgaaaag
tatctcggtcgaaattataaagtcgttgccagtttaggacatgttcgagatttacctaag
agtcaaatgggtattgacatcgaaaacgattatgaaccacgttatatttcgattcgtggt
aaaggtgatgtgatcaaagggctgaagtcagcggctaaaaaagctgatcatatttatcta
gcagccgatcccgatcgtgagggtgaggcgattgcttggcatgtttcccatttgcttaat
ttaagtcccgaagacaacaatcgtgttgtcttcaatgaaattacgaaagatgctgttaag
aacgcttttaaaacaccccgtagcattgatatgaacttagttgatgctcaacaagcacgt
cggattttagaccgcttagtgggttattcaattagtccgattctctgggctaaagttaaa
aaagggcttagtgccggtcgggtacaatcaattgccttgaaactggtgattgaccgcgaa
aaagctattaacgcttttgttccggaagaatattggagtttagctgctgaattccaaaaa
ggacggggcaagaagtttgccgctaatttctacggttttgacggcaagaagcagccatta
gctgataataacgctgttcaagcagttttaagtaaagttgataaggataagccatttgca
gttcaaaatgtgacgaaaaaagaacgtaaacgtttcccagctgcaccatttacgactagt
tcattacaacaagaagccaaccgccgtttgaactataaaacacgtaaaacaatgatgatt
gcacagcaattgtatgaaggtattaacttaggtggtaaagaaggtacggttgggttaatt
acctatatgcgtaccgattctacccgtatttcttctgtggctaagcatgaagctgccacg
tatttacatgaaacactgggtgaagaatacgcagccactaagttacgtaagacaaagaat
cctgaaggtgcacaagatgcccatgaagccattcggcctagttcagtgatgcgcacgcct
gattctttaaaggatgtactcacgcgcgaccaattccgtttgtatcaattgatttggtcc
cgcttcgttgctagtcaaatgacaccagcggtttttgatacggtgaccgttaatttagaa
caaaatggcgttatttttcgtgctaatggttctcagatgaagtttgctggctttaccaag
atttatcaatccgcaacggatgaatctaaagataatcgtttgcctaagttggaagtaggc
gatgatgttaaattggtcaaaactgacccccaacaacatttcacacagccaccagctcgc
tataccgaagctagtttggttaaagcattggaagaaaacggtgttggccgaccatcaact
tacgccccaacaatcgataccattcaaaagcgctactacgttaaattaaacggtaagagt
tttgaaccaaccgagctgggtgaaatcgttgataaaattatcgaagaattcttccctgat
attgttaatattgattttacagccaagttggaagatgaattagatggtattgaggcagct
aaagagaattgggtcgatgtggtcgatcgttactataagccatttgctcaagagttagac
aaggctgaaaaaggtatcgaaaaaattcaaattaaagatgagccagccggttttgactgt
gatatctgtggcgcaccaatggtgattaaaatgggacgatttggtaagttttatgcttgc
agtcgtttcccagattgtcggaatactaaagcaattgtcaaagagattggcgttgtttgt
cctaaatgtggcgaaggccaagtgattgaacgcaaatcaaaacgtaatcggatcttctat
ggttgctcccgcttcccagattgcgatttcgtctcttgggataaaccagtcggtcgtgat
tgtcccgttgacggtcattacctagttgagaagaaagttaaaggcggtcgccaagtgatt
tgtccaaacggtgactatgaagaacaagtgcagaaataa
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