Lapidilactobacillus dextrinicus: LH506_05800
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Entry
LH506_05800 CDS
T06302
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ldx
Lapidilactobacillus dextrinicus
Brite
KEGG Orthology (KO) [BR:
ldx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ldx03016
]
LH506_05800 (rnz)
Enzymes [BR:
ldx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LH506_05800 (rnz)
Transfer RNA biogenesis [BR:
ldx03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LH506_05800 (rnz)
Prokaryotic type
LH506_05800 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
YkiC
Motif
Other DBs
NCBI-ProteinID:
QFG46992
LinkDB
All DBs
Position
complement(1158741..1159682)
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AA seq
313 aa
AA seq
DB search
MEIEFLGTGAGVPARNRNVTSIALKLLAERNEIWLFDCGEGTQQQILRTTIKPRKITKIF
ITHLHGDHIFGLPGFLTSRSNQGGDTALDLYGPVGIKKYVQTSLAVTGTRLSYRINYHEI
TEPGVIFSDHNMTVTEMKLDHRIDSFGYRIQEADFSGELLVDKLLAEQVPSGPIYGKLKA
GADVTLADGRVLHGPDYVAPSRPGRIVAIMGDTRKTDHTLQLAQDADVLVHESTFGQHES
KLARQYYHSTSTQAAQIARLANCKQLLMTHISARYLGRAAHQLQTEAREIFPNSKVVNDF
DIIEIPLPNAIKE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggagattgaatttcttggaacaggagcaggtgtgcctgcacgtaatcgcaatgtcact
agtatcgctttgaagttattagcagagcgtaatgagatttggttatttgattgcggtgaa
ggtacccaacaacaaattttgcgaacaacgattaaaccacgcaaaattaccaaaatattt
atcactcatttacatggtgatcatatttttggtttacctggttttttaacaagtcgctct
aaccaaggtggagatactgcgcttgatctttacggaccagttggcattaaaaagtatgtt
caaacttcattggcagtgactggcactcgcttaagttatcgcattaattatcatgaaatc
acagaacctggggtcatttttagtgatcacaatatgacagttacagaaatgaaacttgat
catagaatcgatagttttgggtatcgtattcaagaggcagatttctcaggagaattatta
gttgataaattattagcagaacaggttccttctggcccaatctatggtaaattaaaagca
ggcgctgatgtcacattagctgatggtcgcgttttacatggtcctgattatgttgcgcca
agtcgtcctggtcgaattgttgctattatgggtgatactcgcaagacagatcacacgtta
cagttagcacaagatgccgatgtcctagtacatgagagtacctttggccaacatgaaagt
aagttagcacggcaatactatcactcaacttcaacgcaagcagcgcaaattgcacggttg
gctaattgtaaacaattgttaatgacacacatctctgcacgttatcttggccgtgctgca
caccaactgcaaactgaagcacgggaaatattccctaacagcaaggtcgttaatgatttt
gatattattgagattccattaccaaacgcaattaaggagtga
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