Lapidilactobacillus dextrinicus: LH506_05940
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Entry
LH506_05940 CDS
T06302
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ldx
Lapidilactobacillus dextrinicus
Pathway
ldx03030
DNA replication
ldx03430
Mismatch repair
ldx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ldx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LH506_05940 (holB)
03430 Mismatch repair
LH506_05940 (holB)
03440 Homologous recombination
LH506_05940 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ldx03032
]
LH506_05940 (holB)
03400 DNA repair and recombination proteins [BR:
ldx03400
]
LH506_05940 (holB)
Enzymes [BR:
ldx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LH506_05940 (holB)
DNA replication proteins [BR:
ldx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LH506_05940 (holB)
DNA repair and recombination proteins [BR:
ldx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LH506_05940 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QFG47019
LinkDB
All DBs
Position
complement(1188496..1189473)
Genome browser
AA seq
325 aa
AA seq
DB search
MKASLETLEQHFATVIAANELSHAYLFVGATNSGKMTLAQWIAQRLFCTNVKDGQPCGEC
AECRRIEEGNNPDYLVIQRATRTIGVDEIRGLKQELSKSGLEGRQRVFVIQDADKMTPAA
ANSLLKFLEEPASQVVIILTTTRLARILPTIQSRLQIVTLQSPTLATREQAIQQLGVDST
FSHVLSTTQFSLEDIQGWLEQVDAVQLQQTFWRWLTQILARKDSAFTLVQTQILSTFKEQ
KLQQLLPDLLLAALSDLFTVKFALNRPLNWTNQQENLQQFANQFSTQQVTALLEIVLGLR
SMQEANVSFQNVLEYTTLRLLVVLA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagcaagcttagaaaccttagaacaacattttgccacagtaattgcagctaatgaa
ttaagtcatgcctacttattcgttggtgctacaaactcgggaaaaatgacgttggctcaa
tggatagcccaacgtctattttgtacaaatgtcaaagatggccagccttgtggtgagtgt
gctgaatgccgccgaattgaagaaggcaataatcctgattacttagtgattcaacgagca
acacgaacaatcggggttgatgaaattcgcggtttaaaacaagaactctctaagagcggt
cttgaaggccgtcaacgtgtctttgtgattcaagatgctgataaaatgacgccggcggca
gctaattctttgttgaaattcttagaagaaccagcgagtcaagtcgtgattatcttaacg
actacgcggttggccagaattttaccgacaattcaatcacgcctacaaattgttacgcta
caatcaccaaccttggctactcgcgaacaggcgattcagcaattgggtgtcgattcaact
ttcagtcacgtcttaagtaccacccaattttcacttgaagatattcaaggctggttagaa
caagttgatgcagtgcagctccaacaaacgttttggcgctggttaacgcaaattttagcg
cgtaaagattcggcttttacattggtccagacgcaaattttgtcgacttttaaagaacag
aaactacaacagttgctaccagacctattgttggcggcgcttagtgatttatttactgta
aaatttgcacttaatcgacctttgaattggactaaccaacaagaaaatttacagcagttt
gctaatcaattctctacccaacaggtgactgctttattagagattgttttaggactgcga
agtatgcaagaggctaatgtcagctttcaaaatgtgcttgaatatacgacgttacgtcta
ttagttgttttagcctaa
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