Lapidilactobacillus dextrinicus: LH506_06205
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Entry
LH506_06205 CDS
T06302
Symbol
rsgA
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
ldx
Lapidilactobacillus dextrinicus
Pathway
ldx00730
Thiamine metabolism
ldx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ldx00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LH506_06205 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ldx03009
]
LH506_06205 (rsgA)
Enzymes [BR:
ldx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
LH506_06205 (rsgA)
Ribosome biogenesis [BR:
ldx03009
]
Prokaryotic type
GTPases
LH506_06205 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
RsgA_N
MMR_HSR1
ABC_tran
GTP_EFTU
AAA_29
Septin
AAA_22
AAA_16
Dynamin_N
nSTAND1
MobB
AIG1
cobW
PBP_like
Zeta_toxin
FtsK_SpoIIIE
AAA_25
RNA_helicase
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QFG47069
LinkDB
All DBs
Position
complement(1237386..1238258)
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AA seq
290 aa
AA seq
DB search
MQTGKIIKSISGFYDVLTAEGKVERTRARGNFRKQKIKPVVGDHVEFEDGYILAIKPRQN
VLVRPPMANLDLAIVVMSAVQPDFSTNLLDRYLVYLAANNMEALIYVSKIDLLSEQQLAQ
LMPLLQQYGEIGYRVYSHGTADFSGIKEAAAGKTLMVMGQSGAGKSTLLNYLLPELKLAT
AEISQSLNRGRHTTRTVTLYPIGVGGAIADTPGFSSLDLSQINSEDLGHYFIEFLDVSGQ
CRFRGCQHLREPDCAVKAAVETGTIAKFRYADYVQLHDELGNLRPTYRKS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcagacaggtaaaattattaaatcaattagtggcttttatgatgtgctaactgctgaa
gggaaagttgagcggacgcgagctcgcggaaactttcgtaagcagaagattaaaccagtt
gttggtgatcatgtagaatttgaagatggctatattcttgctatcaaaccacggcaaaac
gtattagttcgtccaccaatggctaatctagatcttgcaattgtggtgatgagtgctgtt
caaccggatttttcaaccaatctattagatcgctatttggtttatttagctgctaataac
atggaagcactgatttatgtcagtaaaatagatttattatctgagcagcagttagcccaa
ttaatgccactattgcagcaatatggtgaaataggctatcgggtttatagtcacggtact
gctgacttttcagggataaaagaggcagccgctggtaaaacgctaatggtgatgggccaa
tctggtgctggcaagtccactttattaaattatttattaccagagcttaaattggccacg
gcagaaatttcgcaaagcttaaatcgtggtcgtcatacgacacggactgtcactttatat
ccaattggtgtaggtggtgcgattgcagatacgccaggtttttcatcgcttgatcttagt
caaattaattcagaagatctgggtcattattttatcgaatttttggatgtttctggacaa
tgtcgctttcgtgggtgtcaacatttacgtgaacctgattgtgcagttaaggcagcagtt
gagacgggtacaattgcaaaatttcgttatgctgactatgtacaacttcatgatgaattg
ggtaatttacggccaacttatcggaagtcttaa
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