Lapidilactobacillus dextrinicus: LH506_06265
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Entry
LH506_06265 CDS
T06302
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
ldx
Lapidilactobacillus dextrinicus
Brite
KEGG Orthology (KO) [BR:
ldx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ldx03009
]
LH506_06265
Enzymes [BR:
ldx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
LH506_06265
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
LH506_06265
Ribosome biogenesis [BR:
ldx03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LH506_06265
23S rRNA modification factors
LH506_06265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_23
SYY_C-terminal
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QFG47081
LinkDB
All DBs
Position
complement(1251143..1251964)
Genome browser
AA seq
273 aa
AA seq
DB search
MKKERVDILLVQQGLFSSREQAKRAVMAGQVVGKNDERLDKPGEKIDPETVLRVKGQVNP
YVSRGGFKLAKALDVFKIAVTDQIVLDIGASTGGFTDVVLQNGAKMVYALDVGYNQLAWK
LREDPRVTVMERVNFRYSKPEDFELGLPDFAVTDVSFISLKLIMPPLTKILKTNGCLVAL
IKPQFEAGREAVGKHGIVRDRRVHEQVLTEILDFAQSQGFQVLGLDFSPITGGSGNIEFL
TYLKLVGQDEVTQNPEIDIKATVDQAWQVLLTK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaagaacgcgttgatattttactggtacaacaaggcttattcagttccagagaa
caggcaaaacgtgccgtaatggcaggccaagtcgttggtaaaaatgacgaacggcttgat
aaacctggtgaaaaaattgatccagaaacagttttaagagtcaagggccaagttaatccc
tacgtttctcgtggtggttttaaacttgctaaggcacttgatgtctttaaaattgctgta
acggatcagattgttttagatattggggcatcaactggtggctttacggatgttgttttg
caaaatggcgcgaagatggtttatgccttagatgtcggttacaatcagttagcttggaag
ttacgcgaagatccgcgggtaacggtaatggaacgtgttaattttcgttatagcaagcca
gaagattttgaattaggattacctgattttgctgtaacggacgtttcttttatttcttta
aaattaattatgccgccattaactaagattttaaaaacgaatggctgtttagttgcgctg
attaaaccgcaatttgaagccgggcgtgaagctgttggcaaacatggtattgttcgtgat
cgtagagtccacgaacaagtcttaacagagattttggacttcgcacagtctcaaggattc
caagttttgggattagatttttcaccaattacaggtggttcgggaaatattgaattcctc
acgtatttaaaattagtgggccaagatgaagtcacgcaaaatccagaaattgatattaaa
gcaacagttgatcaggcgtggcaagttttattgacgaaataa
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