Lapidilactobacillus dextrinicus: LH506_06425
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Entry
LH506_06425 CDS
T06302
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
ldx
Lapidilactobacillus dextrinicus
Pathway
ldx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ldx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LH506_06425
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ldx01007
]
LH506_06425
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ldx03016
]
LH506_06425
Enzymes [BR:
ldx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
LH506_06425
Amino acid related enzymes [BR:
ldx01007
]
Aminoacyl-tRNA synthetase
Class II (U)
LH506_06425
Transfer RNA biogenesis [BR:
ldx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LH506_06425
Prokaryotic type
LH506_06425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
DUF1427
Motif
Other DBs
NCBI-ProteinID:
QFG47110
LinkDB
All DBs
Position
complement(1279595..1282009)
Genome browser
AA seq
804 aa
AA seq
DB search
MKISYQWLNQFVDTKQIDPQELADQVSLTGIEVASVIAPDAGLKKIVVGHVLSTKPHPDS
DHLTLCQVDIGTEEPVQIVCGAPNVAADQYVIVALPGSRIADNVKIKRGKMRGEASEGMI
CALQEIGFSDSVVPKEFQDGIYVFPEPKPVGELVFKYLGMDDRLIDFDITPNRADTLGMH
GAAWEVGAMLHQHPQFPTVEVNESNTKTSDLLKVTVENQDKVPQYLLKVVQDVQIQPSPL
WLQIRLWNNGVRPINNVVDITNYVMLEYGQPLHAFDYDKLTSHEILVRQARDQEKLTTLD
GEERELVAEDIVITDGQKPVALAGTMGGLDSEITTQTKNIVIESAVFDRTSVRKTAQRHN
LHTEATTRFEKGIDESATEEALQRAAQLMTDLANGQSSQGVLVGHQVVPAAKEILVDPKH
VNHVLGTAISAEQMAAIMTDLGFTHQGQADKLLVTVPIRRWDIAIEADLVEEIARLYGYD
KLPSTLPVGTQTIGHFNKKQTLIRKVKKLLLANGLDEVVSYALVNESEAGRFTYQPSTDI
KLAWPMTQDHAYLRQNLVSGLLNDLKYNLARKQTNVQIFEQGNVFQQINDGEEPKETPTL
AALWTGTVNEDSWLGKAQAVDFYYAKGVLTDLFRNLGIAELVTYQADDAIAELHPGRTAK
IMLGEQVLGFVGELHPTFQHELDLPETYVMQLDLDVILNQELPMLVSQAAPKYPAIERDL
ALIVDQKVTNAAVVEAIKLAAGKYLTNVQIFDVFTGENIGVHKQSLAYRLHFQNPDATLT
DDQVTIAMTKVATKLQDDFAAQIR
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatctcttaccaatggctcaatcaattcgttgatactaagcagatcgatcctcaa
gaacttgctgatcaagtttctttaaccggaattgaagtcgctagtgttattgccccagac
gccggtttgaaaaaaatcgtcgtcggtcatgttttgagtactaaaccacatccagattct
gatcacttaacattgtgccaagttgatattggtacagaagaacctgtgcagattgtttgt
ggcgcacctaatgtagcagctgatcaatatgtaatcgtggccttaccaggttcacggatc
gctgacaatgttaaaatcaaacgcggtaaaatgcgtggtgaggcctctgaaggcatgatt
tgtgctttacaggaaattggctttagcgacagtgtcgtacctaaagaatttcaagatggc
atttatgttttcccagaaccaaaaccagttggcgaattagtcttcaagtatttgggaatg
gatgatcgcttgatcgattttgatattacacctaatcgtgctgatacgttaggtatgcac
ggtgctgcttgggaagttggtgccatgttacatcaacatccacaattcccaacagttgaa
gtgaatgaaagtaatactaagaccagtgatttattaaaggtaaccgttgaaaatcaagac
aaagtgccacaatatttattaaaagtggtccaagatgttcaaattcaaccaagtccactg
tggttgcaaattcgcttatggaataatggtgttcggccaattaataatgtcgttgatatt
actaactatgttatgttggaatacggtcaaccattacatgcttttgactacgacaagtta
acgagtcatgaaattctagttcgtcaggctcgtgatcaagagaaattgaccacacttgat
ggtgaagaacgtgaattagtggcagaagatatcgtcattactgatggtcagaaaccagtt
gccttagccgggactatgggtggcctcgatagtgaaattaccacgcaaactaaaaatatt
gtgattgaatctgctgtatttgatcgtactagcgtgcgtaaaacagcgcaacgtcataat
ttgcacacagaagccacaacccgttttgaaaaaggaattgacgaaagtgccactgaagaa
gcactgcaacgtgcagctcagttaatgactgatttagcaaatggtcaatctagccaaggt
gttttagttggccatcaagttgtccccgctgctaaagaaattctagttgatcctaagcat
gttaatcatgttttgggcacagctattagtgctgaacaaatggctgctattatgactgat
ctaggatttactcatcaagggcaagctgacaaattgttggtaacagtaccaattcgtcgt
tgggatattgccattgaagccgatttggttgaagaaattgcccgcctttatggttatgat
aagttacctagcacattgcctgtgggcacgcaaacaattggccattttaataaaaaacaa
actttgattcgtaaagttaaaaaattattacttgctaatggtttagacgaagttgttagt
tatgcattggttaatgaaagtgaagccggccggtttacttatcagccatctactgatatt
aaattggcttggccaatgacacaagatcatgcttacttacgtcaaaatttagttagcggc
ttattaaatgatttaaaatataatttagctcgtaagcaaaccaacgttcaaatcttcgag
cagggtaatgttttccaacaaattaatgatggtgaagagccaaaagaaacgccaaccttg
gccgctttatggacaggtacagttaatgaagatagttggttaggcaaggctcaagctgtt
gacttttattatgctaagggtgtcttaactgacttattcagaaacttaggaattgctgaa
ttggtaacttatcaagccgatgatgccattgcagaattacatcctggccgcactgctaaa
ataatgttgggcgaacaagtcttaggctttgttggtgagttacatccaacattccagcat
gaattagatttgccagaaacttatgtcatgcaattagatttagatgtgatcttaaatcaa
gagttgccaatgttagtttcgcaagcagcaccaaaatatccagctattgagcgcgatcta
gccttaattgttgaccaaaaggtaactaacgcggctgttgttgaggctattaagttagct
gcaggtaaatatttgaccaatgttcaaatatttgatgtctttactggtgaaaatattggt
gttcataaacaatcattagcttatcggcttcatttccaaaatccagatgcaaccttaact
gacgatcaagtgacaattgctatgacgaaggtagcaacaaaacttcaagatgactttgct
gcacaaattcgttaa
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