Lapidilactobacillus dextrinicus: LH506_06520
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Entry
LH506_06520 CDS
T06302
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ldx
Lapidilactobacillus dextrinicus
Pathway
ldx00521
Streptomycin biosynthesis
ldx00541
Biosynthesis of various nucleotide sugars
ldx01100
Metabolic pathways
ldx01110
Biosynthesis of secondary metabolites
ldx01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ldx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LH506_06520 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LH506_06520 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LH506_06520 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LH506_06520 (rfbB)
00525 Acarbose and validamycin biosynthesis
LH506_06520 (rfbB)
Enzymes [BR:
ldx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LH506_06520 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
NmrA
adh_short
Sacchrp_dh_NADP
KR
Semialdhyde_dh
FliG_M
Motif
Other DBs
NCBI-ProteinID:
QFG47621
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All DBs
Position
complement(1302532..1303566)
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AA seq
344 aa
AA seq
DB search
MMKNIIVTGGAGFIGSNFIHYVVNEHPEVHVTVLDKLTYAGNKANLAGLPEDRVKLVVGD
VCDAELVDQLVSQADAVVHYAAESHNDNSILDPAPFIQTNIVGTYTLLQACRKYDVRYHQ
VSTDEVYGDLPLREDLPGHGEGVGEKFTPDSPYKPSSPYSSSKASADMLVRAWVRTFGLR
ATISNCSNNYGPYQHIEKFIPRQVTNILSGIRPKLYGSGKNVRDWIHTNDHSRAVWLILT
EGKIGETYLIGADGEKDNITVLKMILEAMGQPKDAYDIVKDRPGHDLRYAIDSTKLREEL
GWQPEFTDFSEGLQHTIDWYTNHQDWWQAEKAEVEAKYARNSKL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
attatgaaaaatattattgttaccggtggtgccggcttcatcggcagtaactttattcat
tatgtagttaatgaacatcctgaagtccatgtcaccgtgttagataagttgacttatgct
gggaataaagctaatctagctggtcttcctgaagatcgcgttaaattagtcgtgggtgac
gtttgcgacgctgaattagttgatcaactggttagtcaggctgacgctgttgttcactac
gctgccgaaagtcataatgataattcaattcttgatccggcaccatttattcagactaac
attgtgggtacttatacattgctacaagcttgtcgtaaatatgatgttcgttatcatcaa
gtttcgactgatgaagtttatggtgatttacctttacgtgaagatttgccaggtcatggc
gaaggtgtgggtgagaaatttacaccagactcaccctataaaccaagtagcccttactca
tcatctaaggccagtgcggatatgttagtccgtgcttgggtgcggacttttggattacga
gctaccatctctaactgctccaataattatggcccttaccaacatattgagaagtttatt
cctcgccaggtgacgaatattttatcgggtattcggcctaagctatatggtagtggtaag
aatgtccgtgattggattcatactaacgatcattctcgggccgtttggttaattttaact
gaaggtaagattggtgagacttatttaattggcgccgatggtgaaaaagataacatcacg
gttttgaaaatgattcttgaagccatgggtcaaccgaaagatgcttatgatatcgtaaaa
gatcgtcctggtcatgacttgcgttatgcgattgattcaactaaacttcgtgaagaattg
ggttggcaaccagaattcactgattttagtgaaggtttacaacataccatcgactggtac
acgaatcatcaagattggtggcaggctgaaaaggctgaagttgaagctaagtatgctagg
aatagtaagctttaa
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