Lapidilactobacillus dextrinicus: LH506_06750
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Entry
LH506_06750 CDS
T06302
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ldx
Lapidilactobacillus dextrinicus
Pathway
ldx03030
DNA replication
ldx03410
Base excision repair
ldx03420
Nucleotide excision repair
ldx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ldx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LH506_06750 (polA)
03410 Base excision repair
LH506_06750 (polA)
03420 Nucleotide excision repair
LH506_06750 (polA)
03440 Homologous recombination
LH506_06750 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ldx03032
]
LH506_06750 (polA)
03400 DNA repair and recombination proteins [BR:
ldx03400
]
LH506_06750 (polA)
Enzymes [BR:
ldx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LH506_06750 (polA)
DNA replication proteins [BR:
ldx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LH506_06750 (polA)
DNA repair and recombination proteins [BR:
ldx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LH506_06750 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LH506_06750 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QFG47166
LinkDB
All DBs
Position
complement(1350339..1353011)
Genome browser
AA seq
890 aa
AA seq
DB search
MSQSDQNKKLLLLDGNSLAFRAFFALHNSLDKFTNQEGLHTNALYTFSNMLDNLLASEQP
TNVLVAFDAGKTTFRTKMFDEYKGTRSKTPAELSEQMPYFNTLLDAYGITHYQLADYEAD
DIIGTLAKEAVGKMPVVVVTGDRDLTQLTSDNTTVKVNRKGVNDVEAYTPAYLQEKLGLT
PTQIIDMKGLMGDTSDNYPGVTKVGEKTALKLLAEYGSVENLYEHVDEMKKSKLKENLIN
DKENAFLSKKLATINVEAPLTISLADTERQPVDEAALVQFYQQMNFKSKLAKMPQNDENG
AAMPKMTELPFVELTEANLERALADKKQRSFVIDILGDNYHVEMPIGFAFGTDEQWYYST
DLGLLEAPVLKNWLQDSKQPKDVFDSKKTMVLMERLGTPINAMTFDLLLASYLLDTNDNS
NDLGILAQQYDYFDVQTDLEVYGKGAKRAVPTEQAVLGEHLARKAKAIYDLRPELLKQLQ
DNDQDQLYDEIEAPLAIVLGQMELAGITVDSQRLQQMQTDFGKTLSEIEALIYEDAGHEF
NINSPKQLGTVLFEELKLPVIKKNKTGYSTSVEVLEQLQSAHPIVQRILTYRQISKLQST
YIKGLLKVIHPDHKVHTRYLQTLTQTGRLSSVDPNLQNIPIRLPEGRKIRQAFVPSHPDW
EIFSSDYSQVELRVLAHVSGDKNMQAAFKSGYDIHAHTAMSIFGLNDPSEVTPDMRRQAK
ATNFGIVYGISDYGLSKNIGISRKQAAAFIAAYFEQYPDVKTYIDDIVALAKEQGYVETI
MHRRRYLPDIKSKNFNLRSFAERTAMNTPIQGSAADIIKVAMINMQKRLQAENLQAKMLL
QVHDELIFEAPASEIPILEKLVPSVMDSAVSLDVPLVVESAHGKTWYDAK
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaatctgatcaaaataaaaagcttttattactagatggcaacagcttggcattc
cgagctttttttgccttgcataattcactagataaattcaccaatcaagaaggcttgcat
actaacgccctctatacctttagtaacatgctagataatttactagctagtgaacaacca
accaatgttttagtggcctttgatgcaggcaaaacaacttttcgaacaaaaatgtttgat
gagtataaaggaacgagaagcaaaacgccggctgagctttcggaacaaatgccttatttc
aatacattattagatgcttacggtatcactcattatcaattagctgactatgaagccgat
gatattattgggacattggctaaagaagcagttggcaaaatgcctgttgttgttgtaacc
ggtgatcgtgacttaacgcaactcacaagtgataacactaccgttaaggtgaaccgcaag
ggtgttaatgatgtggaagcttatacaccagcatacctccaagaaaaattaggcttaaca
ccaacacaaatcattgacatgaagggcttaatgggagatacctcggataattatcctggt
gtgactaaagtcggtgaaaaaactgcactcaagctattagctgaatatggcagcgttgag
aacttatatgagcatgttgatgaaatgaaaaagagcaagcttaaagaaaatttgatcaac
gataaagaaaacgcgtttttaagtaaaaagttggcaacaattaacgtggaagcaccatta
actatttctttagctgatactgaacgtcagcctgttgatgaagcagcactagttcagttt
tatcaacaaatgaatttcaaatcaaaactagctaaaatgccacaaaatgatgaaaatggc
gcagctatgcctaaaatgactgaactgccatttgtcgaattaacagaagctaatctagaa
agagcgctggctgataagaagcaacgtagttttgtgatcgatattttgggtgataattat
catgtcgagatgccaattggttttgcttttgggactgatgaacaatggtattacagtact
gatttaggtttattagaagcaccagtgcttaaaaactggctgcaagattcaaaacaacca
aaagatgttttcgatagtaaaaaaacaatggtgctaatggagcgtctaggcacgccaatt
aatgcgatgacttttgatttattgctagcgtcttatttgctagatactaatgataatagc
aatgatttaggaattttagcgcaacaatatgactatttcgatgttcagactgatttagaa
gtttatggtaaaggtgctaaacgcgcagttccaactgaacaggcagtattaggtgaacac
ttagcacgtaaagccaaggcaatttatgacttacgtccggaattattaaagcaacttcag
gataatgatcaagatcaattatatgacgaaattgaagcaccattggccattgttttaggt
caaatggagctcgctggtattacggttgatagtcaacgtctacaacaaatgcagacggac
tttggcaagacgctatcagaaattgaagcgttgatttatgaagatgctggtcatgaattt
aatattaattcgcctaaacaactgggaacggtcttgtttgaagaattaaaattaccagtg
attaagaaaaacaaaacgggttattcaacctcagttgaagttttggaacaattacaaagc
gcacatccaatcgtgcaacgtattttaacttatcggcaaatttctaagttacaatcaact
tatatcaagggtttgcttaaagtcattcatcctgatcacaaagtgcatacgcgttatttg
caaacattgacgcagactggacgcctatcttctgttgatcctaacttgcaaaatattcca
attcggttgccagaaggtcgcaaaattcgccaggcctttgtgccaagtcatcctgactgg
gagattttttctagtgattactcgcaagtggaattgcgtgttttagcgcatgtttctggc
gataagaatatgcaagctgcttttaagagtggttatgacattcacgcgcatactgctatg
agtatttttggcttgaatgatcctagtgaagtaacaccggatatgcggcgtcaggctaaa
gcgactaactttgggattgtatatgggattagtgattatggcttatccaaaaatattgga
atttctcgcaaacaagcagctgcttttattgcggcatattttgaacaatatccggatgtt
aagacttatattgatgacatcgtggctttggcaaaagaacagggctatgtagaaacaatt
atgcaccgacgtcgttatttgcctgatattaaatcaaagaactttaatttgcgttcattt
gctgaacgaacagccatgaacacgcctattcagggtagcgcggccgatattattaaagtt
gccatgattaacatgcaaaagcgtctgcaagctgaaaacttacaagctaaaatgttattg
caggttcatgatgaattaatttttgaagcacctgcatcagaaattccaattttggaaaaa
ttagtaccaagtgtgatggactctgcagtcagtttggacgtgccactagttgttgaaagt
gcccatggcaagacttggtatgatgccaaatag
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