Lapidilactobacillus dextrinicus: LH506_08970
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Entry
LH506_08970 CDS
T06302
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ldx
Lapidilactobacillus dextrinicus
Brite
KEGG Orthology (KO) [BR:
ldx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ldx03400
]
LH506_08970
DNA repair and recombination proteins [BR:
ldx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LH506_08970
Archaeal homologous recombinant proteins
LH506_08970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
Prim_Zn_Ribbon
Motif
Other DBs
NCBI-ProteinID:
QFG47535
LinkDB
All DBs
Position
complement(1822526..1825666)
Genome browser
AA seq
1046 aa
AA seq
DB search
MRPLQLKLNYFGPYRQQIIDFTKFDRTSMFLISGPTGAGKSTIFDGLVFALYDKASGSQR
DPKEFRSDFATIHDETSVELTFTHRGHYYQLIRKPKQTLAKKRGQGTTEQPPQIELTIYV
DETPTQEIKQLTKIDQANKYLADLLQLNAAQFRQIVLLPQGEFRQFLNGDSNQKEAVLRN
LFQTQRYEQWVKQLQTQYKQLKDDNGQRQQKIQTLLQQVNWLPTLASDDQVSVTEQLDLL
QQQTDQMKAKESEQQAQAARLKKELEQQQAELTQRQYIKTLFEQQQEAQNTLATLQQQTP
KITQMQQQLNQLKWAQDNQQHYQSLQQVTAEFTQAKAQLATAKDSAQIIKQQQALLQQTA
AELQTHEKEQQELQTQLIQYADLIPKYQQVTKLQQAKQQLAQEITQQQQQHQQTNEQLQT
VQRQVKELSELQEQTADLYLQQRQLDQSADQLKKLQELVNQATDFYQQISVINKELTTQQ
QHVQVATERQSKIQTDYRQVKSNYAAQQIAILQRDLLPNEPCPVCGSRDHSQIKLVQNDA
PIVSEELLDEMDQQRQAVEKEVATLESSITTLQNSSQQLQQKYEDTWQQIVQQTADTNMA
TLDEVRQFLTLNLKERDKEQAKLSQKQAEITAQQQKLTEYKEQSQQLTAKSQALQVQIND
QQRQLAIVETQFQDLQQQLPTEFTSSAELTDFLTSTKQKVAEFKKQQMTLQQQLQQNQQQ
QTENKTDQRHYQQQIETDQTKIEQLQTEMTTIFNQNWPTLSFKAQCDQYERILTQLDQQA
DLVAQIEQYQQQIVSQQAVLQRLKQQLKDYQEIPDLKQLQQQIKQIQSEQSTVQEQVGQL
KNQISQQIKITENVKELISDIVDITPLQELSELARGNGSQKLGLERYVLQTYLTQVLLVA
NQRLAKLTKGRYRLALAEELGSARKNSGLELNVFDDYVGDYRSVRTLSGGESFIAALALA
LALGEVVQQQTGAIEINALFIDEGFGSLDEEALNTAIEALMSLESQQRMIGIISHVRELQ
AQIPAQLKVISHGNGESSIQYQVDED
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgctacaactaaaattaaactattttggtccttatcgtcagcaaataattgat
tttacaaaatttgatcgaacctcgatgttcttaattagtgggccaacaggtgcgggcaaa
tcaacgatttttgatggcttggtttttgccttatatgataaggcttcaggttcacaacga
gatcccaaggaatttcgttcagattttgctacgatccatgatgagactagtgttgagttg
acgtttacgcatcgggggcactattaccagcttattcgtaagcctaagcaaacattagcc
aaaaagcggggacaagggacaactgaacagcccccacaaattgaattaacgatttatgtt
gatgaaacgcccacccaagaaattaaacagctaactaaaattgatcaggctaacaaatat
ttagctgatttattacaattaaatgcggcccaatttcggcaaattgtcttattacctcaa
ggcgagtttcgccaatttttaaacggggatagtaatcaaaaagaggcagtgttacggaat
ctttttcaaacgcagcgttacgagcagtgggttaaacaattacaaacacaatataaacaa
cttaaagatgacaatggccaacgccaacaaaaaatccaaacgctattgcaacaagttaac
tggctaccaaccttggcctcagatgatcaggtgtcagtgactgagcaactagacttatta
caacaacaaactgatcaaatgaaggcaaaggaatcagaacaacaagcacaagcggcccga
ttaaaaaaagagcttgagcagcaacaagcggagttaacgcaacgtcaatatattaaaaca
ttgtttgagcagcaacaagaagcacaaaatacgttagctaccttacagcaacaaacaccc
aaaattacgcaaatgcaacagcaattaaatcaattaaagtgggcccaggataaccaacaa
cattatcaatcattacaacaagtaactgctgaatttacgcaggcaaaagctcaattagca
actgctaaagattcagctcaaataattaagcaacaacaagcattattacaacagacagca
gccgagctacaaactcatgaaaaagaacagcaagaattacaaactcaattaattcaatat
gcagatttaattcctaagtatcaacaagtaacaaagttacaacaagctaaacagcaatta
gctcaagaaattactcaacaacaacagcaacatcaacaaacaaatgaacaattacaaaca
gttcagcggcaggttaaagaactcagcgaattacaagaacagactgcagatctttatttg
cagcaacggcaattagatcaaagtgcagatcagttgaaaaaattacaggagttggttaat
caagcaacagatttttaccaacaaattagcgtaattaataaagaattaacaacacaacag
caacacgtccaagttgctactgaacgtcaaagtaaaatccaaacagattatcgtcaagta
aagagcaactatgcggcccaacaaatcgctattttacaacgtgatttattgcctaatgaa
ccttgccctgtttgtggttcacgcgatcattcgcagattaagttggttcaaaatgatgca
ccgatcgtgagtgaagaattgcttgatgaaatggaccaacaacggcaagctgttgaaaaa
gaagtggctacgttagagagtagtataacgacgctacaaaacagttcgcaacaacttcaa
caaaagtatgaggatacttggcaacagatagttcaacaaactgctgatactaatatggcg
acgcttgacgaggttaggcagtttttgactttgaatttaaaagaacgagataaagaacaa
gccaaattaagtcaaaaacaggcagaaataacagctcagcaacaaaaattaacagaatac
aaagaacagtcgcaacaattaacggccaagtcccaagcactacaagttcagattaatgat
cagcaacgtcaattagctattgtggagacacagtttcaagaccttcaacagcaattgccg
acagagtttacttcaagtgcagaattaacagatttcttaactagtaccaaacaaaaggtg
gctgagtttaaaaaacagcagatgaccttacaacaacagcttcaacaaaatcaacaacaa
caaactgaaaataaaactgatcaacgtcattatcaacaacaaattgagactgatcaaact
aaaattgaacagttgcaaacagaaatgacaactatttttaatcaaaattggcctacgctt
tcttttaaggcgcaatgtgatcaatacgaacgaattttaacacagttagaccaacaggca
gatttagtagcccaaattgagcagtatcagcaacaaatcgttagtcaacaagcagtttta
caacgattaaaacaacaattaaaagattatcaagaaataccagatctaaaacagcttcaa
caacagattaaacaaatacaatcggagcaaagtacggttcaagaacaagtgggacagctt
aaaaatcagatttcacaacaaattaaaatcactgaaaacgtcaaagaattaatatcggat
atagtggatataacgcctttacaagaactaagcgaacttgctcgcggcaatggtagtcag
aagttaggtctggagcgctatgttttgcaaacttatttgactcaggttcttttagttgct
aatcagcgtttggctaaactaactaaaggtcgatatcgtttagcgttggcagaagaacta
ggaagtgcacgtaagaattctggtctagaacttaatgtttttgatgattatgtgggtgat
tatcggagcgtgcgaactttatctggtggtgaaagttttattgcggcgcttgcattggca
cttgcactaggtgaagttgtgcaacaacaaaccggtgcaattgaaattaatgcgctcttt
attgatgaaggctttggttcactagatgaagaagcgctaaataccgctattgaagcttta
atgagtttagaaagccaacagagaatgattggtattatcagtcatgtacgtgaattacaa
gcccaaattccagcacagttaaaagttatcagtcatggtaacggtgagagtagtattcag
tatcaagtagatgaggattaa
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