Leclercia sp. J807: GNG26_00540
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Entry
GNG26_00540 CDS
T06440
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
lea
Leclercia sp. J807
Pathway
lea00541
Biosynthesis of various nucleotide sugars
lea01100
Metabolic pathways
lea01250
Biosynthesis of nucleotide sugars
Module
lea_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
lea00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GNG26_00540 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lea01005
]
GNG26_00540 (rfaD)
Enzymes [BR:
lea01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
GNG26_00540 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
lea01005
]
Core region
GNG26_00540 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
QGU08917
LinkDB
All DBs
Position
complement(107934..108866)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI
MAGEEFGDIDAIFHEGACSSTTEWDGKYMMDNNYQYSKEILHYCLEREIPFLYASSAATY
GGRTSDFIESREYEQPLNVYGYSKFLFDEYVRQVLPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSDGFKRDFVYVGDVAAVNLWFWENGVSGIFNLGTGRA
ESFQAVADAALAYHQKGTIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttaccggcggcgcgggctttatcggcagcaatattgttaaggctctcaat
gacaaaggcatcactgacattctggtggtggataacctgaaagacggcaccaagtttgta
aacctggtggatctgaacattgccgactacatggataaggaagattttctcatccagatt
atggcgggcgaagagttcggcgatatcgacgcaatcttccatgaaggtgcctgctcctcc
accaccgagtgggacggcaagtatatgatggataacaactatcagtactctaaagagatc
ctgcactactgcctggagcgcgaaattccgttcctgtacgcctcttccgcagcaacctac
ggcgggcgtacctccgactttatcgagtcccgcgagtacgagcagccgctgaacgtctac
ggctactccaagttcctgtttgacgaatatgtacgccaggtactgccagaagcgaactcc
cagattgtcggcttccgctacttcaacgtctacggaccgcgcgaaggccataaaggcagc
atggcaagcgtggccttccacctcaacacccagctgaacaacggcgaaagcccgaaactg
tttgaaggcagcgatggcttcaagcgtgacttcgtctacgtgggcgacgtggcggcggta
aacctgtggttctgggaaaacggcgtctccgggatcttcaacctgggcaccggccgggcg
gaatccttccaggcggtggctgacgcagcgctggcgtatcaccagaaaggcaccattgag
tacatcccgttcccggacaagctgaaaggccgctatcaggcattcacccaggcggatctg
accaacctgcgtgccgctggctatgacaagccgttcaagaccgttgccgaaggggtaacg
gaatatatggcctggctgaaccgcgacgcgtaa
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