Leclercia sp. J807: GNG26_03290
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Entry
GNG26_03290 CDS
T06440
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
lea
Leclercia sp. J807
Brite
KEGG Orthology (KO) [BR:
lea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lea03021
]
GNG26_03290 (rapA)
Transcription machinery [BR:
lea03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
GNG26_03290 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QGU09427
LinkDB
All DBs
Position
complement(701143..704049)
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPATGENRLYARNDSPVTRVMFNPGDT
VTSHEGWQLKIEDVKEENGLLAYIGTRLDTEETGVMLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFSLRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQH
DADNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDIMVVDEAHHLVWNVDAPSREYMAIE
QLAERVPGVLLLTATPEQLGLESHFARLRLLDPNRFHDFDLFVEEQKNYRPVADAVALLL
AGKHLSNDELNTLSDLIGEQDIEPLLQAANSDREGADAARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTVRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTANRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFSEEDSGAQVLLCSEIGSEGRNFQFASRLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWFHEGLDAFEHTCPTGRTIYDSVHNELTGYLAAPENT
EGFDELIKTCREQHDALKAQLEQGRDRLLEIHSNGGEKAQRLAESIEEQDDDTSLISFAM
NLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATP
VRLLLDKNGTNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVYAILQQGESQVEKAAR
ALIDAARSEADEKLSAELSRLEALRAVNPNIRDDELAAIETNRQQVLESLNQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgacacagaaagcgaacttggattagga
acggtagtggcgctggatgcgcgtatggtcactctcctcttccccgccaccggtgaaaac
cgtctgtatgctcgcaatgattcccctgttacccgcgtgatgtttaacccgggcgacacc
gttaccagccatgaaggctggcagctgaagattgaagacgtaaaagaagagaatggactg
ctcgcctatatcggaacccgactggataccgaagagacgggcgtcatgctgcgcgaagtg
ctgctcgacagcaaactggtcttcagcaagccgcaggatcgcctgttcgccggtcagatc
gaccgcatggatcgcttctcgctgcgctaccgtgcgcgcaagttccagagcgagcagtac
cgcatgccgtggagcggtctgcgcggccagcgcaccagcctgattccccatcagctcaac
atcgcccatgacgttggccgccgccatgcgccgcgcgtcctgctggcggatgaagtcggt
ttaggtaaaaccatcgaagcgggcatgatcctgcaccagcagctgctctccggcgcggcc
gagcgcgtgctgattgtggtgccagaaaccctgcagcaccagtggctggtggagatgctg
cgtcgcttcaacctgcgtttctccctgtttgacgacgagcgctacgccgaagcccagcac
gacgccgataacccgttcgaaaccgaacagctggtgatctgctccctggacttcgtgcgc
cgcagcaagcagcgtcttgaacacctctgtgatgccgagtgggacatcatggtggttgat
gaagcgcaccatctggtgtggaatgtcgacgcgccgagccgtgaatatatggcgattgaa
cagctggccgagcgcgtacctggcgtactgctgctcaccgctacgccggaacagctgggt
ctggagagccactttgcgcgtctgcgcctgctggatccaaaccgtttccatgactttgac
ctctttgtcgaagagcagaaaaattatcgcccggtggcggatgctgttgccctgctgctg
gcgggcaagcacctctccaacgacgagctcaacaccctgagcgatctgattggcgaacag
gatatcgagccgttactccaggcggccaacagcgatcgtgaaggcgccgacgccgcacgc
caggagctggtctccatgctgatggacaggcacggcaccagccgcgtgctgttccgtaac
acccgtaacggggtgaaaggcttcccgaaacgcgagctgcataccgttcgtctgccgctg
cccacccagtatcagacggcgatcaaggtctccggcatcatgggcgcacgcaaaacagcg
gaagagcgcgcccgggacatgctctatccggaacagatttatcaggagtttgaaggcgat
actggcacctggtggaacttcgacccgcgcgttgaatggctgatgggttatctgaccgcc
aaccgttcccagaaagtgctggtcatctgcgccaaagccaccaccgcgctgcagcttgag
caggttctgcgcgagcgggaaggtattcgcgcggcggtgtttcatgaaggcatgtccatt
atcgagcgcgaccgcgccgcggcgtggttctccgaagaggacagcggcgcccaggtgctg
ctctgctctgagatcggctccgaggggcgtaacttccagttcgccagccgtctggtgatg
ttcgatctgccgttcaacccggacctgctggagcagcgtattggtcgtctggaccgtatt
ggtcaggcgcacgacattcagatccacgttccgtatctggaaaaaaccgcccagtctgtg
ctggtgcgctggttccacgaagggctggatgcgtttgaacatacctgcccgaccggtcgt
accatttacgatagcgtgcataacgagctgacgggctatctggcggcgccggaaaacacc
gagggctttgacgagctgatcaaaacctgccgtgaacagcatgacgccctgaaagcgcag
ctggagcagggccgcgaccgcctgctggagatccactccaacggcggcgagaaagcccag
cggctggcagagagcattgaagagcaggatgacgataccagcctgatcagcttcgccatg
aacctgtttgatatcgtcggtatcaatcaggacgatcgcggcgagaacctgattgtgctg
accccgtccgatcacatgctggtgccggacttcccgggcctgccggaagatggctgcacc
atcaccttcgagcgtgatgtggcgctgtcccgcgaggatgcgcagttcatcacctgggaa
cacccgctgatccgcaacggtctggatctgatcctctccggcgacaccggcagcagcacc
atctcgctgctgaagaataaggcgctgccggtgggtaccctgctgctggagctgatctac
gtggtggaggcccaggcaccgaaacagctgcaactcaaccgcttcctgccggccacgccg
gtgcgtctattgctggataaaaatggcaccaatctggcggcgcaggtcgagtttgagagc
tttaaccgccagctgagcgcggtgaatcgccataccggcagcaagctggtgaatgcggtg
cagcaggatgtctacgccatcctccagcagggtgagtctcaggttgagaaagcagcgcgc
gccctgattgacgcggcgcgcagcgaggcggatgaaaaactgtctgcggagctctctcgt
ctcgaggccctgcgtgcggtgaacccgaatattcgtgacgatgaactggcggcgattgaa
accaatcgtcagcaggtgcttgagagcctgaaccaggcgggatggcgtctggatgcgctg
cgccttatcgttgtgacgcatcagtaa
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