Leclercia sp. J807: GNG26_03700
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Entry
GNG26_03700 CDS
T06440
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
lea
Leclercia sp. J807
Brite
KEGG Orthology (KO) [BR:
lea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lea03019
]
GNG26_03700 (hrpB)
Enzymes [BR:
lea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GNG26_03700 (hrpB)
Messenger RNA biogenesis [BR:
lea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GNG26_03700 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
CON_HrpB
Helicase_C
HA2_N
ResIII
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QGU09504
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All DBs
Position
797028..799457
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AA seq
809 aa
AA seq
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MSLLPVAAVLPDLLLALQHAPQVLLNAPTGAGKSTWLPLQILAQGAINGKIILLEPRRLA
ARNVAQRLAELLGEKPGETVGYRMRAETCVGANTRLEVVTEGILTRMLQQDPELNGVGLV
ILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNERLQRLLPEAPTIVSEGRT
FPVERRYQSLSAQLRFDEAVAVATAELLRQEPGSLLLFLPGVIEIQRVQEQLSRRVSDDV
VLCPLYGALPLAEQRKAILPAPPGQRKVVLATNIAETSLTIEGIRLVVDSAQERVANFDP
RTGLTRLLTQRVSQASMTQRAGRAGRLEPGICLHLTPFEQAERAAAQGTPEIMQSDLSGL
LMELLQWGCREPSQLNWLDLPPATNLAAARRLLTQLGALAGEQLTAFGQKMATLGNDPRL
AAMLASATDDDDIATAAKLAAILEQPPRGASSDLAQAFSRNQPEWQQRARQLSARLNSRG
GAPESDRVPALLAKAFPDRIARRRGLDGRYQLANGMGAMLQSDDAMTRHEWLIAPLLLQG
SQSPDARILQAIAVDIDTLIAASPGLVAQSDTVEWDEAQGTLKALRRSQIGRLTVSIKPL
AKPSEEELHQAMLNGIRDKGLSVLNWTPEAEQYRLRLHCAAQWLPEYAWPAVDEASLLAN
LENWLLPQMSGVHSLRALKALDVKAALQNLTDWSLRQRLDTELPGHYTVPTGSRIAIRYH
EDNPPALAVRMQEMFGEANTPAIAQGRVPLVLELLSPAQRPLQITRDLGAFWAGSYREVQ
KEMKGRYPKHVWPDDPANTAPTRRTKKYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
gtgtccttgttgccggtcgccgctgtccttcccgatctccttctcgccttacaacacgcc
ccccaggtgctgctgaacgcgccaaccggtgcgggtaaatcgacctggctgccgctgcag
atcctggcgcagggggcgatcaacggcaaaatcatcctgctcgaaccgcgcaggctcgct
gcccgcaacgtggcgcagcgcctggcggagctgctgggggaaaagcccggcgagacggtc
ggctaccggatgcgcgccgaaacctgcgtgggggccaacacccggctggaggtggtcacc
gaggggatcctcacccggatgctgcagcaggatcccgagcttaacggcgtagggctggtg
atcctcgatgagttccacgagcgcagtttgcaggcggatctggcgctggcgctgctgctg
gatgtccagcaggggctgcgggacgatctcaaactgctgatcatgtctgcgacgctggat
aacgagcggctccagcgcctgctgccggaggcacccaccattgtgtctgagggccggacg
tttccggtggagcggcgctatcagtcgctctccgcccagctgcgtttcgacgaagcggtg
gcggtggcaaccgccgaactgttgcgccaggagccgggctcgctgctgctgttcttaccc
ggcgtgattgagatccagcgggtacaggagcagctgtcacgtcgcgtaagtgatgacgtg
gtgctctgcccgctgtatggcgcgctgccgctggccgagcagcgtaaagcgatcctgcca
gccccgccggggcagcgcaaagtggtgctggcgaccaatattgccgaaaccagcctgacc
atcgagggcatccggctggtggtggactccgcccaggagcgggtggcgaatttcgacccg
cgcaccggcctgacccgtctgttgacccagcgcgtgagccaggcctccatgacccagcgc
gccgggcgcgccgggcgactggagccgggtatctgcctgcatcttacgccgtttgagcag
gcagaacgcgccgcggcgcagggcacgcccgaaattatgcaaagcgatctcagcggcctg
ctgatggagctgttgcagtggggctgccgggagccctcgcaattaaactggctggatctg
ccgcctgcgactaaccttgcggcggcccggcgcttattaacgcagcttggggcgctggcg
ggagagcagctcaccgcctttggtcagaagatggcgacgcttggcaacgatccgcggcta
gcggccatgctggccagcgcgacggatgacgacgatattgcgacggcggcaaagctggcc
gctattcttgaacagccgccgcgtggcgccagtagcgatctggctcaggccttctcccgc
aatcagccggagtggcagcagcgcgcccgacagctgagtgcgcgcctgaacagccggggc
ggggcgccggagagcgaccgggtgcccgcgctgctggcgaaggcgtttcctgaccggatc
gcccgccgccgtgggcttgatggacgctatcaactggcgaacggcatgggcgcgatgcta
cagagcgacgacgccatgacccgccacgagtggctgattgccccgctgctgttgcagggc
agccagtcgccagatgcccgtattctgcaggccatagcagtggatattgatactctgatc
gccgcttctccgggcctggtggcacagtctgacaccgtagagtgggatgaagcgcaaggc
acgctgaaggcgctgcggcgttcccagattggccgcctgacggtgagcattaagccgctg
gcaaagccctcggaagaggagctgcatcaggcgatgcttaacggcatccgcgataaaggg
ctcagcgtactgaactggaccccggaggcggagcagtaccggctccgcctgcactgcgcg
gcccagtggttgccggagtatgcgtggcccgcggtagatgaagcctcgctgctggcaaat
ctggaaaactggttactgccgcaaatgagtggcgtacactccctgcgcgcgttgaaagcg
ctggatgttaaggcggcgttacagaacttaaccgactggtcgttacgccaacgtctggat
accgagcttccggggcattacactgtgcccaccggcagccggatagccattcgttatcat
gaagataatcctccggcgctggcagtacgcatgcaggagatgtttggcgaggcgaacacg
cctgccattgcgcaggggcgggtgccgctggtgctggagctgttgtcaccggcccagcgt
ccgctacagatcacccgggatttgggtgcattctgggctggcagctaccgcgaggtgcaa
aaagagatgaaagggcgttatcccaaacatgtctggccggacgacccggcaaataccgcg
ccgacccggcgtacgaagaagtattcgtag
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