Leclercia sp. J807: GNG26_03870
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Entry
GNG26_03870 CDS
T06440
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lea
Leclercia sp. J807
Pathway
lea03030
DNA replication
lea03430
Mismatch repair
lea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GNG26_03870 (dnaE)
03430 Mismatch repair
GNG26_03870 (dnaE)
03440 Homologous recombination
GNG26_03870 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lea03032
]
GNG26_03870 (dnaE)
03400 DNA repair and recombination proteins [BR:
lea03400
]
GNG26_03870 (dnaE)
Enzymes [BR:
lea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GNG26_03870 (dnaE)
DNA replication proteins [BR:
lea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GNG26_03870 (dnaE)
DNA repair and recombination proteins [BR:
lea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GNG26_03870 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QGU09538
LinkDB
All DBs
Position
838586..842068
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGTAHGA
GMKPVIGADFHVQSELLADEMTQITVLALNNTGYQNLTLLISRAYQRGYGPQGPWIDRAW
LAELNEGLLLISGGRMGDVGRCLLRGNTALVEQCVDFYKEYFPDRFYLELIRTGRPDEES
YLHAAVALAEEQGLPVVATNDVRFINADDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVMKSKEGL
EERLEFLFPDPAVRAEKRPEYDERLDVELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDESGLHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRRAKQGLEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
LSYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFEDGAKKNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGQYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNQGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLADALKAADQHSKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQTVLDGERETLGLY
LTGHPINQYLKEIERYVGGYRLKDMHPTERGKITTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGASWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcacagcgactattccatgattgatggg
ctggcgaagaccgggccgctggtgaaaaaggcggcctcgcttggcatgcctgcgctggcg
atcaccgacttcaccaacctgtgcggtctggtgaagttctacggaacggcgcacggtgcc
gggatgaagccggtaattggtgctgattttcacgtacagagcgagctcctcgccgatgaa
atgacgcaaattaccgtcctggcgctgaacaataccggctatcagaacctgacgctgttg
atctcccgtgcctatcagcgcggctacggcccgcagggtccgtggatcgatcgcgcgtgg
ctggcggagctgaatgaggggctgctgctgatctccggcgggcgtatgggcgacgtaggc
cgatgcctgctgcgcggcaacaccgccctggtggagcagtgcgtcgatttttataaagag
tatttcccggatcgcttctacctggagctgatccgcaccggtcgtcctgatgaagagagc
tatctgcacgccgcagtcgccctggcggaagagcagggcctgccggtggttgccaccaac
gatgtgcgcttcatcaacgccgatgattttgacgcccatgaaattcgcgtcgctattcac
gatggttttaccctcgacgatccgaaacggccgcgtaactattcgccgcagcagtacatg
cgcagcgaagaggagatgtgcgagctgttttccgatatcccggaagcgctggagaacagc
gtagagatcgccaagcgctgtaacgtcaccgtccgtctgggtgaatacttcctgccgcag
ttcccgaccggcgacatgaccaccgaagacttcctggtcatgaaatcgaaagaaggtctg
gaagagcgccttgagtttctcttcccggatccggctgttcgcgccgaaaagcgcccggag
tatgacgagcgtctggacgttgagctccaggttattaaccagatggggttccccggctac
ttcctgatcgttatggagtttatccagtggtcgaaagacaacggcgtaccggtagggccg
ggccgtggttcgggtgccggatcgctggtggcctatgcgctgaaaattaccgatctcgat
ccgctggaatttgacctgctgttcgaacgcttcctcaacccggaacgtgtctcgatgccc
gactttgacgtcgatttctgcatggagaaacgcgaccaggtcattgaacacgtggcagac
atgtacggtcgtgatgcggtatcgcagatcattaccttcggtaccatggcggcaaaagca
gttatccgcgacgtgggccgcgtgctggggcatccgtacggctttgttgaccgcatctcg
aagctggtgccgcctgacccgggcatgaccctggcgaaagcgttcgaagcggagccgcag
ctgccggaaatctacgaggcggatgaagaggttaaagcgctgatcgacatggcgcgtaag
ctggaaggggtcacccgaaacgccggtaaacacgccggtggggtggtcattgccccgacc
aaaattaccgactttgcgccgctctactgcgatgaatcgggcctgcatccggtcacccag
tttgacaagaatgacgtggaatatgccgggctggtgaagtttgacttcctcggcttgcgt
acgctcaccatcatcgactgggcgttgaagatgatcaacccgcgccgggccaagcagggc
ctggagccgattgatattgccgcgatcccgctcgatgacaagaaaagtttcgacatgctg
caacgttcggagaccacggcggtcttccagcttgaatcccgcggcatgaaagatttgatc
aagcgtctgcagcctgactgcttcgaagatatgatcgcgctggtggcgctgttccgtccg
gggccgctgcagtccgggatggtagataactttatcgaccgtaagcatggccgcgaggag
ctctcttatccggatgttcagtggcagcatgaaagcctgaagccggtgctggagccaacc
tacggcatcatcctgtatcaggaacaggtcatgcagatcgcccaggtgctctccggctac
accctcggcggcgcggatatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgctcgatctttgaagatggggcgaagaaaaacggcatcgacggtgaactg
gcgatgaaaatcttcgatctggtagagaaatttgccggatacggatttaacaaatcgcac
tctgcggcctacgcgctggtctcctatcagacgctgtggctgaaggcgcactacccggcc
gagtttatggccgcggtaatgaccgccgatatggacaacaccgagaaggtggtcggtctg
gtagatgagtgctggcgcatggggctgaaaatcctgccgccggacatcaactccggtcag
taccatttccacgtcaatgacgacggagagattgtctacggcatcggcgcgattaaaggg
gtgggtgaaggccctatcgaagcgatcatcgaagcccgtaaccagggcggctatttccgc
gagctgtttgacctctgcgcgcgaaccgatattaaaaagctcaaccgccgggtgctggaa
aagctgattatgtccggggcgtttgaccgtctcgggccgcatcgcgccgcgctgatgaac
tcgctggccgacgccctgaaggccgccgatcagcactcgaaagccgaagccattggtcag
gcggatatgttcggcgtgctggcagaagagccggagcagattgaacaatcctatgccagc
tgtcagccgtggccggaacagacggtactggatggcgagcgtgaaacgctgggcctgtac
ctgaccgggcacccgatcaaccagtatcttaaagaaattgagcgctatgtcggaggctac
cggctgaaagacatgcatccgacagaacgtggtaagattaccacggctgcggggctcgtc
attgccgcgagggttatggtcaccaaacgcggcaatcgtatcggcatctgtacgctggat
gaccgttccgggcggctggaggtgatgttattcaccgacgcgctggataaataccagcag
ctgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
gggggacttaaaatgaccgcccgcgaagtgatggacattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggaccattccagtacatctctactatcag
agggcggatgcgcgtgcacggttgcgctttggtgcgtcgtggcgtgtctctccgagcgat
cgtttactgaacgatctacgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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