Leclercia sp. J807: GNG26_06600
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Entry
GNG26_06600 CDS
T06440
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lea
Leclercia sp. J807
Pathway
lea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GNG26_06600 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lea03019
]
GNG26_06600 (rhlE)
Enzymes [BR:
lea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GNG26_06600 (rhlE)
Messenger RNA biogenesis [BR:
lea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GNG26_06600 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HI1480
AAA_19
DUF6482
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QGU10033
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All DBs
Position
1417141..1418502
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AA seq
453 aa
AA seq
DB search
MSFDTLGLNPEILRAVAEQGYREPTPIQQQAIPAVLAGRDLMASAQTGTGKTAGFTLPLL
QRLISSEPHAKGRRPVRALILTPTRELAAQVGENVREYSRYLNIRSLVVFGGVSINPQMM
KLRGGVDVLIATPGRLLDLEHQNAVKLDSVEILVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIALEGYEVDPSIKAEPIQNGRQGGRGQGGGRGQGGGGRGQQQPRRSEGGA
PKAASKPPRRDGDAKPAGEGQRRRRPRKPASAQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgatacccttggcctgaacccggaaattctgcgcgctgtagcggagcagggt
taccgcgaaccgacccctattcagcagcaggccattcccgctgtactggcaggccgcgat
ctgatggccagcgcccagaccgggaccggtaaaaccgctggctttaccctgccgctgctg
caacgcctgatctcaagcgaaccgcacgccaaaggccgtcgcccggtgcgcgccctgatc
ctgaccccaacccgtgaactggccgcccaggtgggtgagaacgtgcgtgagtacagccgc
tatctcaacatccgctcgctggtggtgtttggcggggtgagcatcaacccgcagatgatg
aaactgcgcggcggcgtggacgtgctgatcgccaccccgggccgtctgctcgacctggaa
caccagaacgccgttaagctcgacagcgtggagatcctggtgctcgacgaagccgaccgc
atgctggacatgggctttatccatgatattcgtcgcgtgctggcaaaattgccggcccgt
cgtcagaacctgctcttctccgccaccttctccgacgagatcaaaggtctggcggaaaag
ctgctgcacaatccgctggaagtggaagtggcgcgtcgcaacaccgcttccgaacaggtg
acccagcacgttcactttgttgataaaaagcgcaagcgcgaactgctctcccagatgatt
ggcgaagggaactggcagcaggtgctggtcttcacccgtaccaagcacggggcgaaccac
ctggcggaacagctgaacaaagacggcatccgcagtgcggccatccacggtaacaagagc
cagggggctcgtacccgcgcgctggccgatttcaaatctggtgatatccgcgtactggtg
gcaaccgacatcgccgcccgcggcctggatattgaagagctgccgcacgtggtgaactac
gagctgccgaacgttccggaagattatgtccaccgtatcggccgtaccggtcgcgcggcg
gcaacgggcgaagcgctgtctctggtctgtgtggatgagcacaagctgctgcgcgacatc
gaacgcctgctgaaaaaagagatcccgcgtatcgccctcgagggctatgaggtagatccg
tccatcaaagctgagccgatccagaacgggcgtcagggcggacgtggtcagggtggtgga
cgcgggcagggcggcggtggccgtggtcagcagcagccgcgccgtagcgaaggcggcgcg
ccgaaagcggccagcaagccaccgcgtcgcgatggcgacgcgaaaccggcaggtgaaggc
cagcgccgacgccgtccgcgcaaacctgccagcgcgcagtaa
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