Leclercia sp. J807: GNG26_13470
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Entry
GNG26_13470 CDS
T06440
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lea
Leclercia sp. J807
Brite
KEGG Orthology (KO) [BR:
lea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lea03016
]
GNG26_13470
Enzymes [BR:
lea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GNG26_13470
Transfer RNA biogenesis [BR:
lea03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GNG26_13470
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
QGU11297
LinkDB
All DBs
Position
complement(2813541..2814668)
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AA seq
375 aa
AA seq
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MNYQMITTNDELASLCDLTRDASAIALDTEFVRTRTYYPQLGLIQMYDGKRVSLIDPLGI
TDWTPMRELLLDTAITKYLHAGSEDLEVFLNTFGIMPQPLIDTQILAAFAGRPLSWGFAA
MVEEYTGLAIDKSESRTDWLARPLTERQLDYAAADVFYLLPIAGQLMKEAEASGWLPAAL
NECRMTQLRRQETTDPKEAWRDISNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVR
EEHLWAVARYMPGSLGELDSIGLSGSEIRFHGKTLLALVAKAQQLPDEALPEPLLNLMDM
PGYRKAFKAIKALVQEVAAESKVSAELLASRRQINQLLNAHWKLKPQNGTPELIAGWRGE
LMADRLNALLAEYPQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaattaccagatgatcaccaccaacgacgaactggcttcgctgtgcgatctcacccgt
gatgcatccgccattgcgctggacaccgaatttgttcgtactcgcacttactacccgcaa
ctgggtctgatccagatgtatgacggcaagcgggtatcgcttatcgatccgctggggatc
accgactggacgccgatgcgtgagctgctgctggacaccgccatcaccaaatatctgcat
gccggcagtgaagatctggaagttttcctcaacaccttcggcatcatgccgcagccgctg
attgatacccagatcctcgccgccttcgccggtcgcccgctgtcatggggttttgccgcc
atggtggaggagtacaccgggctggcgatcgacaagagcgaatcccgcaccgactggctg
gcgcgcccgctgacggaacgccagctcgactacgcggcggcagacgtgttctacctgctg
ccgatcgccggtcagctgatgaaagaggccgaagcctccggctggctgcctgccgccctg
aatgagtgccggatgacgcagctgcgtcgtcaggagacgaccgatccgaaagaggcgtgg
cgcgacatcagcaacgcctggcagctgcgcactcgccagctggcctgtctgcagctgctg
gccgactggcgtctgcgtaaggcgcgcgagcgtgacctggcggtgaactttgtggtgcgt
gaggagcatctctgggccgtggcgcggtacatgccgggcagcctgggcgagctggatagc
atcgggctttcgggttcggagatccgtttccacgggaaaacgctgctggcgctggtggca
aaagctcaacaactgccggatgaggcgctgccggagccgctgctgaatctgatggatatg
ccggggtatcgcaaagcatttaaggccatcaaggccctggtgcaggaggtggcggcagag
agtaaagtcagcgccgagctgctggcctcacgtcgccagatcaaccagctgctgaacgcg
cactggaagctgaaaccgcaaaacggcacgccagaactgattgccggatggcgcggggaa
ctgatggccgatcgcctgaatgcgttactggcagagtatccgcagtaa
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