Leclercia sp. J807: GNG26_17890
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Entry
GNG26_17890 CDS
T06440
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lea
Leclercia sp. J807
Pathway
lea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GNG26_17890 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lea03400
]
GNG26_17890 (recD)
Enzymes [BR:
lea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GNG26_17890 (recD)
DNA repair and recombination proteins [BR:
lea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GNG26_17890 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Helicase_RecD
Viral_helicase1
SH3_13
AAA_11
AAA_22
UvrD-helicase
SLFN-g3_helicase
MukB
nSTAND3
AAA_16
AAA_28
UvrD_C
PhoH
Herpes_Helicase
DO-GTPase1
CbiA
T2SSE
ATPase
Phageshock_PspD
DEAD
Mg_chelatase
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QGU12105
LinkDB
All DBs
Position
complement(3777092..3778912)
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AA seq
606 aa
AA seq
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MTMQEHLLEAVEQRVLRRLDVQFAMMVAGNDEPAVMLAAAILSRDAGEGHVCLPLSRLRA
EAKSAALQACFALFDQEPDWTATLLRSRAVSAGDEPTPLVLTGERLYLNRMWRYERAVAR
FFSEANQPLPHDSADVQRTLNALFTSDEAVNWQKVAAAVALTRRISVISGGPGTGKTTTV
ARLLAALIQMAGEEKCRIRLAAPTGKAAARLTESLGGALQKLPLTEAQRARFPTEASTLH
RLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLTMMSRLIDALPPHARVIFLGDRDQL
ASVEAGAVLGDICTWASAGFTVRRAQELASMTGCEMQGNVSPVAGALRDSLCLLQKSYRF
GSDSGIGQLAAAVNRGDRHAIRSVFDGKFSDIEKKQLQSGEEYLAMLEDALQGYQHFLDS
VQQQASEAEILAAFGRYQLLCALRDGPFGVAGLNERLEQVLAQKRRIGRQPHSRWYEGRP
VMISRNDSALGLFNGDIGIALDRGQGLRVWFQMPDGSMKSVQPSRLPEHETAWAMTVHKS
QGSEFDHAALILPNQMSPVVTRELVYTAITRARRRLSLYADEGVLTQAVTTRTERRSGLS
AIFEAL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcaggaacacttgctggaagccgtagagcagcgcgtgctgcgtcgtctggat
gtacagtttgcgatgatggtagcagggaacgacgaaccggcggtgatgctagcggcggcg
atcttaagccgtgatgcgggagaagggcacgtttgcctgccgttgtcccggctgcgtgcc
gaggcgaaaagcgccgcgctgcaggcctgttttgcgctgtttgaccaggagccggactgg
accgctacgctgctgcgctcccgcgcggtgagcgcaggggatgaaccgacgccgctggtg
ctcaccggcgagcggctctacctcaaccggatgtggcgctatgagcgggcggtggcccgc
ttctttagcgaagccaaccagcctttgccccatgacagcgccgacgttcagcgcacgctg
aatgcgctgttcacctctgacgaagccgtcaactggcaaaaggtggcggcggcagtcgcg
ttaacgcggcgtatttccgtgatttccggcggaccggggaccggcaaaacgaccaccgtt
gcccgcctgctggcggcgctgatccagatggcgggagaagagaaatgccggatccggctg
gcggcacccaccggcaaagcggccgctcgtcttaccgaatcgctgggcggcgcgctgcaa
aaactgcccctgaccgaggcccagcgcgcgcgattcccgacggaagcgagcacgctgcac
cgtttgcttggcgcgcagccgggcagccagcgcctgcgttaccatgcaggtaatccgctg
cacctggatgtgctggtggtggatgaggcgtcgatgattgacctgacgatgatgtcgcgt
ctgattgacgccctgccgcctcatgcccgggtgatcttcctcggcgatcgcgaccagctg
gcctccgtcgaagcgggcgcggtgctgggtgatatctgtacctgggccagcgctggcttt
acggtccggcgcgcacaggagcttgccagcatgacgggatgcgagatgcagggcaacgtc
agcccggtcgcgggtgcgctacgcgacagcctgtgcctgctgcaaaaaagctaccgtttt
ggtagcgattctggcatcgggcaattggcggccgcggtcaaccggggcgatcgccacgct
atccgctcggtatttgatggcaaattcagtgatattgagaaaaagcagctccagagcggg
gaagagtatctggcgatgctggaagatgccctgcaggggtatcaacattttctcgacagc
gtgcagcagcaggcctccgaagcggagatcctggcggcatttggccgctaccagctgctt
tgcgccttacgggatggccccttcggcgtcgccgggcttaacgaaaggcttgagcaggtg
ctggcgcaaaaacgccgtattggccgtcaaccccattcacgctggtatgaaggcaggccg
gtgatgatttcacgcaacgacagcgcgctgggcctgtttaacggcgatatcgggattgcg
ctggatcgtgggcagggattgcgggtctggttccagatgccggatggcagtatgaagtcc
gtgcagcccagccgtctgccggagcatgaaaccgcctgggccatgacggtgcataaatcc
cagggctctgagttcgatcacgcggcgctgattttacctaaccagatgtcgcccgtcgtg
acccgcgagctggtctataccgccattacccgcgcccgtcggcggttgtcgttgtatgcg
gatgaaggggtactgacgcaggctgtcaccacccgtacagagcgacgcagcgggctgagt
gcgatctttgaagccttataa
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