Leclercia sp. J807: GNG26_17895
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Entry
GNG26_17895 CDS
T06440
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
lea
Leclercia sp. J807
Pathway
lea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GNG26_17895 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lea03400
]
GNG26_17895 (recB)
Enzymes [BR:
lea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GNG26_17895 (recB)
DNA repair and recombination proteins [BR:
lea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GNG26_17895 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QGU12106
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All DBs
Position
complement(3778909..3782454)
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AA seq
1181 aa
AA seq
DB search
MTDTAESLNPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFSRPLNVEELL
VVTFTEAATEELRGRIRANIHELRIACLRQSTDNPLYASLLDEIDDKQQAAQWLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESQLRYQACADFWRRHCYPLPRDIA
EAVHNLWKGPDELLRTIDRYLQGEAPVIKSAPPADETLASRHEKIVGLIAAMKQQWSDSV
AEIEAVIERSGIDRRKFNRGNQAKYIERVTAWAQEEKHSYQLPDALEKFSQSFLAERTKA
GGEVPEHPLFSAIDNLLAEPLTLNDLMITRALSEIREAVAREKRRRGELGFDDMLSRLDD
ALNSDNGEALAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRQQPDTALLLIGDPKQAIY
AFRGADIFTYMKARGEVAAHYTLDTNWRSAPGMVESVNTLFSQMNDAFMFREIPFLPVKS
APRNATLRFENKGDFQPAMRIWLMEGEGCGVGDYQTFMAQHCAAQIRDWLSAGVRGEAIL
HRGEDAQPVKASDITVLVRSRQEAALIRDALTLLGIPSVYLSNRDSVFETLEAQEMLWLL
QAVLAPERESTLRSALASAMLGLNAQDIDTLNNSETLWDEAVEEFTRYRERWQKRGVMAM
LRDLMTQRNIAENMLATAGGERRLTDILHISELLQEAGAQLESEYALVRWLAQHIAEPNS
NASSQQMRLESDKHLVKIVTIHKSKGLEYPLVWLPFIANYRVQDQAFYHDRKTFEAVLDL
SKADDSVELAEAERLAEDLRLLYVALTRSVWHCSLGVAPLFRRRGEKSGDSDFHLSALGR
LIQRGEPKDAAGLRQCLEALCNEHIALQVAGVADAARWHMPDPVLPDLQARQVARMLYDD
WRVTSYSGLQQHGHSIAQDLMPRLDVDAAGTGEVPQEPELTPHQFPRGASPGTFLHSLFE
ALDFTQPVSPEWVLEMLQKGGYDARWEPVLTRWIAQVLETPVNEEGISLSQLTAADKQVE
MEFYLPIAGPLTAGALDALIREYDPLSRGCPPLDFRQVRGMLKGFIDLVFRHNGRYYLLD
YKSNWLGENSEAYTPQAMARAMQSHRYDLQYQLYTLALHRYLRHRIADYDYQHHFGGVIY
LFLRGVDGSSPGAGCFATRPDEALIEQMDSLFSASNEELTQ
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgctgagtcccttaaccccttacgtttaccgttacagggggagcgactg
atagaggcctcagcgggaaccggaaaaaccttcaccatcgctgcactctatctgcgactg
ctgctcggtctgggcggcagcgcggcgtttagccgcccgctcaacgtggaagagctactg
gtggtaaccttcaccgaagccgcgacggaagagctgcgcggacgtatccgcgccaacatt
catgagctgcgcatcgcctgcctgcgacagagtacagataacccgctgtatgccagcctg
ctggatgagattgacgataaacagcaggcggcacagtggctgctgctggcggaacggcag
atggatgaggctgccgtgtttactatccacggcttctgccagcgcatgctcagcctgaat
gcgtttgaatcaggcatgctttttgagcagcaactcatcgaagatgaatcccagctgcgc
taccaggcgtgcgccgacttctggcgtcgccattgctaccctctgccacgtgatatcgcc
gaagcggtacataatctctggaaaggcccggacgagctactgcggaccatcgatcgttat
ctgcagggggaagccccggtcatcaaatctgctccgcctgcggacgaaacgctggcttca
cgccatgagaagattgtcggcctgatcgccgccatgaaacagcagtggtctgacagcgtg
gcggaaatcgaggcggtgattgagcgctccggcatcgaccggcgtaaattcaaccgcggc
aaccaggcaaaatatatcgagcgcgttacggcctgggctcaggaagagaagcacagctat
cagctgcctgacgcgctggaaaagttctcccagtcattccttgccgagcgcacgaaagcg
ggcggcgaagtgccggaacacccgctcttttccgccatcgataacctgctggcagagccg
ttaacccttaacgatctgatgatcacccgtgcgctgtcagagatccgcgaagcggtggcg
cgggaaaagcgccgtcgcggtgagctgggcttcgacgatatgctcagccgtctcgatgat
gccctcaacagcgacaatggcgaggcgctggctgccgccattcggacccgttttccggtg
gcgatgatcgatgaatttcaggataccgatccccagcagtaccggattttccgccgcatc
tggcgccagcagccggatacggctctgctgctgattggcgacccgaaacaggcgatctac
gccttccgtggggcggatattttcacctacatgaaagcgcgtggcgaagtggccgcgcac
tatacgctggataccaactggcgctcggcccccggcatggtggagagcgtgaacacgctc
ttttcacagatgaacgatgccttcatgttccgtgagatccccttcttaccggtcaaatct
gccccgagaaacgccacgctgcgtttcgagaataaaggcgatttccagcccgcgatgcgc
atctggctgatggagggcgaagggtgtggcgtcggagattaccagacctttatggcccag
cactgcgcggcgcaaatccgcgactggctgagcgctggcgtacgcggcgaagccattttg
caccggggcgaggatgcccaaccggtgaaggcgtcagacattacggtgctggtgcgcagc
cgtcaggaggcggcgttgatccgtgatgcgctgaccctgcttggcattccttcggtctat
ctctccaaccgcgacagcgtatttgaaacgctggaagcccaggagatgctctggctgttg
caggcggtgctggcgccggagcgtgaaagtaccctgcgcagcgccctggcaagcgccatg
ctcggccttaacgcccaggatatcgatacgctgaataacagtgagacactctgggatgag
gcggtagaagagtttacccgctaccgtgagcgctggcagaagcggggcgtaatggcgatg
ctgcgcgatctcatgacccagcgcaacatcgccgaaaatatgctggcaactgccggaggg
gaacgccgcctgaccgatattctgcacatcagcgaactgttgcaggaggcgggggcccag
cttgagagtgaatatgccctcgtgcgctggctggcgcagcacattgccgagccgaacagc
aacgcctcaagccagcaaatgcgtctcgaaagtgacaagcatctggttaaaatcgtcacc
attcacaaatcgaaagggctggagtatccgctggtctggctgccctttattgccaactac
cgggttcaggatcaagccttttatcacgatcgtaagaccttcgaagcggtgcttgacctc
agcaaggccgacgacagcgtggagctggccgaggcggaacggctggcggaagatttacgc
ctgctctatgtggcactgacccgttcggtgtggcactgtagcttaggcgtggcgccgctg
ttccgtcggcgtggcgaaaaatcgggtgacagcgacttccacctgagcgcgcttggacgc
ctgatccagcgcggtgagccgaaagatgccgccggtctgcgccagtgtctggaggcgttg
tgcaatgagcacattgcattgcaggttgccggtgtggcagacgccgcccgctggcatatg
ccggatccggtgttaccggatctgcaggcgcggcaggtggcccgcatgctgtatgacgac
tggcgggtcaccagctattccgggcttcagcagcacgggcacagtatcgcccaggatctg
atgccacgcctcgatgttgatgccgcaggcaccggtgaagtgccgcaggagccagagctg
acgccgcaccagtttccgcgcggcgcctcgccgggcacctttttacacagcctgtttgaa
gcactcgattttacgcagcccgtctctccggagtgggtgctggagatgctgcaaaaaggg
gggtacgatgcccgctgggagccggtgttaacccgctggatcgcgcaggtgctggagact
ccggtcaatgaggaggggatctcactgagccagctgacagccgctgataaacaggttgag
atggagttttatctgcccatcgccgggccgctcaccgccggggcgctggatgcgttgatc
cgcgagtacgatccgctctcccggggctgcccgccgctcgattttcgtcaggtgcgcggc
atgctgaaaggctttatcgacctggtcttccgccataatggccgctattacctgctggac
tataaatccaactggctgggtgaaaacagcgaggcttataccccgcaggccatggcccgg
gcgatgcagtcgcaccgctacgatctgcagtaccagctctacaccctggcgctgcaccga
tatttacgtcaccgtattgccgactatgactatcaacaccatttcggcggagtgatctac
ctgtttttacgtggcgtggatggcagctcgccgggcgccggttgctttgccacccgtcca
gatgaagcgttaatcgaacaaatggatagcctgttttccgccagcaacgaggagctaaca
caatga
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