Leclercia sp. J807: GNG26_19345
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Entry
GNG26_19345 CDS
T06440
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lea
Leclercia sp. J807
Pathway
lea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GNG26_19345 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lea03019
]
GNG26_19345 (pnp)
03016 Transfer RNA biogenesis [BR:
lea03016
]
GNG26_19345 (pnp)
Enzymes [BR:
lea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GNG26_19345 (pnp)
Messenger RNA biogenesis [BR:
lea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GNG26_19345 (pnp)
Transfer RNA biogenesis [BR:
lea03016
]
Prokaryotic type
tRNA degradation factors
GNG26_19345 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
aRib
S1_2
OB_RRP5_4th
KH_2
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
QGU12378
LinkDB
All DBs
Position
complement(4088701..4090836)
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKSSKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHDQQQIVIQNINDLVKEAGKPRWDWQPEAAND
ALNARVAALAEARLSDAYRITDKQERYTQVDAIKSETIATLVAEDESLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDADK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPVKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSREGISALQMDIKIEGITKEIMQVALNQAKGARLHILSVMEQA
INAPRGDISQFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRVYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAGEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgttcgtaaattccagtacggtcaacataccgttacgctggaaacc
ggcatgatggcacgtcaggctactgctgctgttatggtaagcatggatgacaccgcggta
ttcgtgaccgtggttggccagaaaaaagctaaaccaggtcaggacttcttcccactgacc
gtaaactaccaggagcgtacttacgctgccggtaaaatcccgggtggtttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgt
ccgctcttcccggaaggcttcgttaacgaagttcaggttatcgcaaccgttgtttccgtt
aacccacaggttaacccggacatcgttgcgatgatcggcgcatccgcagccctctccctg
tctggtattccattcaacggtcctatcggtgctgcgcgcgtgggttacatcaatgaccag
tacgttctgaacccaactcaggacgagctgaagtcaagcaagctggacctggttgttgcc
ggtaccgaagctgcggtactgatggttgaatccgaagcagaactgctgagcgaagaccag
atgctgggcgcggtggtctttggccacgatcagcagcagatcgttatccagaacatcaac
gacctggtgaaagaagccggtaaaccacgttgggactggcagccagaagcggcaaacgac
gcgctgaatgcacgcgttgcagccctggccgaagcgcgtctgagcgatgcttaccgcatc
accgacaagcaagagcgttatacccaggttgacgcgatcaaatctgaaaccatcgctacg
ctggtggcagaagatgagtccctggacgctaacgagctcggcgaaatcctgcacgctatc
gagaaaaacgttgttcgtagccgcgttctggcaggcgagccgcgtatcgatggccgtgaa
aaagatatgatccgtggtctggatgtgcgtactggcgtgctgccacgtactcacggttct
gcgctgttcacccgtggtgaaacgcaggcgctggttaccgcgaccctgggtactgcccgt
gacgcacagaacatcgacgaactgatgggcgagcgcactgacagcttcctgttccactac
aacttccctccgtactccgtaggtgaaaccggtatggttggctcgccgaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgcggcgtgctggctgtgatgccagatgctgataaa
ttcccgtacaccgttcgtgtggtttctgaaatcaccgaatctaacggttcttcttctatg
gcttccgtatgcggtgcttctctggcactgatggatgcgggcgtaccggtgaaagcggcc
gttgcgggtatcgcaatgggtctggtgaaagaaggcgacaacttcgttgttctgtctgac
atcctgggcgacgaagatcacctgggtgacatggacttcaaagtcgcgggttcccgcgaa
ggtatctctgccctgcagatggatatcaaaattgaaggcatcaccaaagagatcatgcag
gttgcgctgaaccaggctaaaggtgcacgtctgcacatcctgagcgtgatggaacaggcg
atcaacgcgccgcgtggcgacatttcccagttcgctccacgtatccacaccattaagatc
agcccggacaagatcaaagacgttatcggtaaaggcggttctgttatccgcgccctgacc
gaagagactggcaccaccatcgaaatcgaagatgacggtactgtgaagatcgcagcgacc
gacggcgagaaagcgaaatacgctatccgtcgtatcgaagagatcactgccgagatcgaa
gtgggccgtgtctacaatggtaaagtgacccgtatcgttgactttggcgcattcgttgcc
atcggtggcggtaaagaaggtctggtacacatctctcagatcgctgacaagcgcgttgag
aaagtgaccgattacctgcagatgggtcaggaagtgccggttaaagttctcgaagttgac
cgtcagggccgtatccgtctgagcattaaagaagcgaccgagcagtctcagcctgccgct
gcgccggaagctccggctggcgaacagggcgagtaa
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