Leclercia sp. J807: GNG26_22170
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Entry
GNG26_22170 CDS
T06440
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lea
Leclercia sp. J807
Pathway
lea03030
DNA replication
lea03410
Base excision repair
lea03420
Nucleotide excision repair
lea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GNG26_22170 (polA)
03410 Base excision repair
GNG26_22170 (polA)
03420 Nucleotide excision repair
GNG26_22170 (polA)
03440 Homologous recombination
GNG26_22170 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lea03032
]
GNG26_22170 (polA)
03400 DNA repair and recombination proteins [BR:
lea03400
]
GNG26_22170 (polA)
Enzymes [BR:
lea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GNG26_22170 (polA)
DNA replication proteins [BR:
lea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GNG26_22170 (polA)
DNA repair and recombination proteins [BR:
lea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GNG26_22170 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GNG26_22170 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QGU12895
LinkDB
All DBs
Position
complement(4654799..4657591)
Genome browser
AA seq
930 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPSHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAVSGVEADDVIGT
LAREAEKMGRPVLISTGDKDMAQLVTPGITLINTMTNTILGPEEVVAKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYSEQDKIAGLTFRGAKTMAAKLEQNK
EVAYLSYQLATIKTDVELDLTCEQLEVQQPAIEELLGLFKQYEFKRWITDVEAGKWLQAK
GAKPAAKPKETLVIDAEEEPEEEASVLSSEHYETILDEAQLQRWIEKLQQAPVFAFDTET
DSLDNVSANMVGLSFATEPGVAAYVPVAHDYLDAPEQIARERVLELLKPILEDEKALKVG
QNLKFDRGILQNYGIELRGIAFDTMLESYILDSVAGRHDMDSLSDRWLKHKTVTFEQIAG
KGKNQLTFNQIALEEAGHYAAEDADVTLQLHLKMWPKLQKHAGPLNVFQNIEMPLVPVLS
RIERNGVKIDPAVLHKHSEEIALRLHELEQKAHEIAGEPFNLSSTKQLQTILFEKQGIKP
LKKTPGGAPSTSEEVLEELALDYPLPKVILQYRGLAKLKSTYTDKLPLMINPKTGRVHTS
YHQAVAATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLS
RDKGLLTAFAEGQDIHRATAAEVFGMPLESVTGEQRRSAKAINFGLIYGMSAFGLSRQLN
IPRKESQKYMDLYFERYPGVLQYMENTRAQAKEKGYVETLEGRRLYLPDIKSSNAARRAG
AERAAINAPMQGTAADIIKRAMIAVDAWLEKEQPRVRMIMQVHDELVFEVHKDDLEPVSK
KIHELMENSVKLDVPLLVEVGQGENWDQAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatccccgaaaatccgcttattctcgtcgacggctcgtcttacctctatcgg
gcatatcacgcctttcctccgctgactaacagtgcgggagagcctacgggcgcaatgtat
ggtgtgctgaacatgctgcgtagcctgatcatgcagtatcagccaagccatgccgccgtg
gtcttcgatgcgaaaggcaaaactttccgggatgagctgttcgaacattacaaatctcat
cgtccgccgatgccggacgatctgcgcgcgcaaattgagcctctgcataagatggtaaaa
gcgatggggctgcctttgatggccgtctcgggcgtagaagcggacgatgttatcggtacg
ctggcgcgtgaagctgagaaaatgggccgcccggtcctgatcagcaccggcgataaagat
atggctcagctggtcacgccggggatcaccctgattaacaccatgaccaataccattctt
gggccggaagaggtcgtcgctaagtatggcgtgccgccggaactgatcatcgacttcctc
gcgctgatgggcgactcctccgataacattcctggcgtaccgggcgtgggcgaaaagacg
gcccaggcgctgctgcaaggtctgggcgggctggatacgctgtatagcgagcaggataaa
atcgccgggctgaccttccgcggtgccaaaaccatggccgctaagcttgagcaaaacaaa
gaggtggcctacctctcctatcagctggcaaccatcaaaacagacgtcgaactggatctg
acctgtgaacagctggaagtgcagcaaccagccatcgaagagctgctaggcctgtttaag
cagtacgagttcaaacgctggataaccgatgtcgaagcggggaaatggctgcaggcgaaa
ggggctaaaccggcggctaagccaaaagaaaccctggtgatcgatgcagaagaggagccg
gaagaagaagccagcgtgctctcttctgagcattacgaaaccattctggatgaagcgcag
ctgcaacgctggattgaaaagctacagcaggcaccggtattcgctttcgataccgaaacc
gacagcctcgataatgtctccgccaatatggtgggcctctcctttgccacagagccgggc
gttgccgcctatgtgccggttgcccacgactatctggacgcgcctgaacagatcgcccgt
gagcgcgtgctcgaactccttaagccgatccttgaagatgaaaaagcactcaaggtgggg
caaaacctgaagttcgatcgcggtatcctgcagaactatggtattgagctgcgcggcatt
gcgttcgataccatgctggagtcctatatcctcgacagcgtcgccggtcgtcacgatatg
gattcgctctccgaccgctggctgaagcataaaaccgtcacctttgagcagatcgccggt
aagggtaagaatcagctgacctttaaccagatcgccctggaagaagcgggacactatgcg
gcagaagatgctgacgtcacgctgcaactgcatttaaagatgtggccgaagctgcaaaaa
cacgccgggccgctgaacgtgttccagaatattgagatgccgctggtgccggttctgtcc
cgcatcgagcgcaacggcgtgaaaatcgatccggctgtgttgcacaagcactcagaagag
atcgccctgcgtctgcacgagctggaacaaaaagcgcatgagatcgccggcgagcccttt
aatctctcgtccactaaacagctgcagaccatcctgtttgaaaagcagggtatcaagcca
ctgaaaaaaacgccgggcggggcgccttccacctctgaagaggtgcttgaggagctggcg
ctggactatcctctgccaaaagtgatccttcagtatcgtgggctggcaaagctgaaatcg
acctacaccgataagctgccgttgatgatcaacccaaaaacgggccgcgtacacacctct
taccatcaggcggtagcggctaccgggcgactctcctcaaccgatcctaacctgcaaaac
attccggtgcgtaatgaagaagggcgccgtatccgtcaggcgtttattgcgccagaggat
tacgtcattgtctctgctgactattcacagattgagctgcgtatcatggcgcacctctcc
cgggataaagggctgttgaccgcctttgcggaagggcaggatattcaccgggccacggca
gccgaagtgtttggtatgccgctggagagcgtcaccggggaacagcgccgcagcgcgaag
gcgatcaactttggccttatctacggcatgagcgcctttggcctctcccgccagctcaat
attccgcgcaaagagtcgcagaagtatatggatctctatttcgagcgctacccgggcgtg
ctgcaatatatggagaacacgcgcgcccaggcgaaagaaaaaggctatgtcgaaaccctg
gaagggcgtcgcctctatctgccggacatcaaatccagcaatgcggcccgccgtgccggt
gccgaacgtgcggcaatcaacgccccgatgcaggggacggcggcagatatcattaaacgt
gcgatgatcgccgttgatgcctggctggagaaagagcagccgcgggtgcggatgatcatg
caggtgcacgatgaactggtgtttgaggtgcataaagacgatttggaaccggtctcgaaa
aagatccatgaactgatggagaacagcgtcaaactggatgtgccgttgctggtagaagtc
ggtcagggagaaaactgggatcaggctcactaa
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