Leclercia sp. J807: GNG26_22355
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Entry
GNG26_22355 CDS
T06440
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
lea
Leclercia sp. J807
Pathway
lea00040
Pentose and glucuronate interconversions
lea01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lea00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GNG26_22355
Enzymes [BR:
lea01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
GNG26_22355
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
Pel9A-like_beta_helix
Chondroitinas_B
Motif
Other DBs
NCBI-ProteinID:
QGU12925
LinkDB
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Position
complement(4693898..4695988)
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AA seq
696 aa
AA seq
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MKSKIPLALMMCSAFSAMATEQPHVWKAIAFGQSTDLNFSSNVLPEKIGVNDVTIDGKKL
SPQESADLAKAITLESRGGKIANSHDGLTFFYTELPTAENFVLQATVRVDQFGPENGAKP
AAQEGAGLLVRDVLGNPRQQPLKTGYEEFPAASNQVMNAIMTQDKKDHQRVKMQAITREG
ISHPWGDAGAAIKKQSYKEEVDLSQTPEFRLKLQRTDDGFITAWAPLDSDTWVSKRVPRA
DLISVQNKDHYYVGFFASRNAKITVTNASLTTTSAHTVPSEPWQAEPLPVVVQLASGTVS
ASPDYLLQARANEDGVFSVRQNEVVIGNEKAVKAGEMYTLPARLEQTSTFTVTFTPAHGT
PVNQQLTVERIADRDTTHLYAAPDGKADAQGTADAPLDLATAIALLAPGGKLVLKSGDYP
QSEIPVAASGSSDKLKTLQADGKVVIHGLLLDASYWHINGIDVTGKSLRVQGSHNLIERV
TAYRNDDTGIQISSPEKIGRPLWASYNRVVDSESYANEDPGKINADGFAVKMRVGEGNRL
ERCYSHDNIDDGFDLFNKIEDGANGVVVIENSVASNNTSNGFKLGGEGQPVAHQIRNSKA
TGNHLDGFTDNFNPGRLVVENNIAVDNQRFNYIFRPSPYGDVTTQGTFTGNVSIRNKPGE
YDDAVTGNIDNTNYFIKKGKSVNSEGKELDKTQVKM
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctaaaatacctctggccctgatgatgtgtagcgccttttccgctatggcaaca
gaacaacctcatgtctggaaagccatcgcctttgggcaatcaacggatctgaatttttcc
tccaacgtgctgcccgaaaaaatcggcgtcaatgatgtgaccatcgacgggaaaaagctc
tcaccccaggagagcgctgacctggcgaaagccatcaccctggaaagccggggcggcaaa
atcgccaactcccacgacggcttaacgtttttctataccgagctgccaacggcagaaaat
ttcgttttgcaggccactgtccgggtcgaccagtttgggccggagaatggcgcgaaacct
gccgcgcaggagggcgccggactgctggtgcgcgatgtcctcggcaacccgcgccagcaa
ccgctaaaaacgggttatgaagagtttccggcggcatcgaatcaggtgatgaacgccatc
atgacccaggataaaaaagaccatcagcgagtaaaaatgcaggctatcacccgggagggg
atcagccatccgtggggtgatgccggagccgccattaagaagcagagttataaggaagag
gtggatctgagccagacgccggaatttcgcctgaaactccagcgcaccgacgacggcttt
attaccgcctgggccccgctggacagcgacacctgggtgagcaagcgcgtgccgcgcgct
gacctgatttcggtacagaataaggaccactattacgtcggcttttttgcctcccgcaat
gccaaaattacggtcactaacgcctcgctcaccaccaccagcgcccataccgtgccttcg
gagccctggcaggcagagccactgccggtcgtggtgcagctggcgtccggtacggtcagc
gcttcgccagattacctgctgcaggcgcgcgctaatgaggacggggtatttagcgtaaga
caaaacgaagtggtgatcggtaatgagaaagcggtgaaagcaggcgagatgtacaccctg
ccagcccgactggagcagaccagcaccttcacggtgacctttacgcctgctcatggcacg
ccagtgaatcagcagctcaccgtcgaacgcattgcggacagagatacgacgcacctctat
gccgctccggacggaaaagcggatgcacaaggcaccgccgatgcgccactggatctcgcc
accgctatcgccctgctggcgcccggcggcaagctggtgctgaaaagcggcgattacccg
cagagtgagatccccgtcgctgccagcggcagcagcgataaactcaaaaccctgcaggca
gacggtaaagtggttatccacggcctgctgcttgatgccagctactggcatatcaacggt
atcgacgtgaccggcaaaagtttgcgcgtccagggtagccataacctgatcgagcgcgtc
acggcctaccgcaacgatgataccgggatccagatctcctccccggaaaaaattggccgg
ccattatgggcaagctataaccgggttgtggattctgaatcttacgccaatgaagatccc
ggcaagattaacgccgatggcttcgcggtgaaaatgcgggtgggggaaggtaaccgattg
gagcgttgctattcccacgacaatatcgacgacggttttgacctgttcaacaagattgaa
gatggcgcaaacggcgtggtcgtgatcgagaactcggttgccagcaacaataccagtaac
ggctttaagctcggcggagaagggcagcctgtggcgcatcagatccgcaacagcaaagcc
acgggcaatcacctggacggcttcaccgataactttaaccccggcaggctggtggtggag
aataatatcgcggtggataaccagcgctttaactatatcttccgtccaagcccgtatggc
gatgtgacaactcagggaacctttaccggaaacgtatcgatccgtaataagccaggcgag
tacgacgatgcggtaacaggaaacattgataacacgaactactttatcaagaagggtaaa
agcgtgaacagtgaagggaaagaactggataaaacgcaggtaaaaatgtag
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