KEGG   Leucobacter coleopterorum: G7066_09840
Entry
G7066_09840       CDS       T06501                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
leb  Leucobacter coleopterorum
Pathway
leb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:leb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    G7066_09840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:leb03019]
    G7066_09840
Messenger RNA biogenesis [BR:leb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     G7066_09840
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 DUF459
Other DBs
NCBI-ProteinID: QIM18816
UniProt: A0ABX6JWY1
LinkDB
Position
complement(2084787..2086463)
AA seq 558 aa
MPNPPYAPPALEKGTLRITPLGGLGEVGRNMTVYEIDGKLLIVDCGVLFPEVQHPGVDLI
LPDITKIEDRLGDIVAIVLTHGHEDHIGGVPYLLKKREDIPLVGSKLTLAFISAKLKEHR
ITPKTREVAEGDRVNYGPFDLEFVAVNHSIPDALAVAIRTEAGLVIGTGDFKMDQLPLDG
RITDLRAFARLGEEGVDLFMTDSTNADVPGFTPSEKNIGPVIEQVIAKTRGKVVVASFSS
HVHRVQQVLDAAHANGRRVVLLGRSMVRNMKIASDLGYLNVPDGVIVDLKKSGDIPDHRI
VYMSTGSQGEPMAVLSRMVNQEHQVEVGEGDTVILASSSIPGNETSIYRIIDGLMKLGAN
VVHKGNAKVHVSGHAAAGELLYCYNIVKPKNVMPIHGEYRMLVANAALAIETGVPQNRTV
IAENGTVVDLSNGVARAVGQIDIDFIYVDGKSVGRVTDDDLRDRRTLAEEGFISVITVVE
TSLAQIVSGPEIHAKGVAEDQHVFDSIKPQIADALQQAMKEGMKDHHQLQQIVRRTVGRW
VGTKLRRKAMIVPVVVVV
NT seq 1677 nt   +upstreamnt  +downstreamnt
gtgcccaatccgccttacgctccgcccgcactcgagaaaggcaccctgcgcatcacaccg
ctgggtggtctcggtgaggtcggtcgaaacatgaccgtttacgaaatcgacggcaaactg
ctgatcgtcgattgtggtgtgctcttcccagaggtgcagcacccgggtgtggatttgatc
ctgcccgatatcaccaagatcgaggatcgcctcggcgacatcgtcgcgatcgtgctgacg
cacggccacgaggatcacattggtggcgtcccctatctgctgaagaagcgtgaagacatc
ccgttggtcggctccaagctgacgctggcgttcatctcggccaagctcaaggaacaccgc
atcaccccgaagactcgtgaggtcgcagaaggggaccgcgtcaattacgggcccttcgat
cttgagttcgtggcggtcaatcactcgattcccgatgcgctcgcggttgcgatccgcacc
gaggccggccttgttattggcacgggtgatttcaagatggatcagctgccgctcgacggc
cgcatcaccgatctgcgcgcgttcgcccgcctcggtgaagagggtgttgacctcttcatg
accgactcgaccaacgctgacgtgcccgggttcacgccctccgagaagaacatcggaccc
gtgatcgaacaggtcatcgcaaagacccgcggcaaggttgtggtcgcaagcttctcgagc
cacgtgcaccgcgtgcagcaggtgctcgacgccgcgcacgccaacggccgccgtgtcgtg
ctgctcggccgctcgatggtgcgcaacatgaaaatcgcttccgatcttggctacctcaac
gtgccagacggcgtgatcgttgacctgaagaagagcggtgacattccggatcaccgcatc
gtctacatgtccaccggttcgcagggtgagcctatggctgtgctcagtcgcatggtcaat
caggagcaccaggttgaggtcggcgagggtgacacggtcattctggcctccagctcaatc
cccggtaacgagacctcgatttaccgcattatcgatggactgatgaagctcggtgccaac
gtcgtgcacaagggcaatgccaaggtgcacgtttcgggtcacgccgccgcgggcgaactg
ctctactgctacaacatcgtgaaaccgaagaacgtgatgccgatccacggcgaataccgc
atgctcgtggcaaacgccgcactcgcgattgagacgggtgtgccgcagaaccgcactgtc
atcgccgaaaatggcacggtggttgatctctcgaacggcgtcgcgcgcgcggtcggccag
atcgacatcgacttcatttatgtcgacggtaagagcgtcggacgagtgaccgacgatgac
ctgcgggatcgccgcacgctggcggaagaagggttcatctcggtgatcaccgtggttgag
accagcctcgcgcagatcgtgtcgggccccgagattcacgccaagggtgtagctgaggac
cagcacgtcttcgactcgatcaagccccagatcgccgatgcgctgcagcaggccatgaag
gagggtatgaaggatcaccatcagctgcagcagatcgtgcgtcgcacagtcggtcgctgg
gtcggaacgaagctgcgtcgcaaggcgatgatcgttccagtcgtggtggtggtgtag

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