Lentzea guizhouensis: BBK82_28645
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Entry
BBK82_28645 CDS
T04448
Name
(GenBank) heavy metal transporter
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
led
Lentzea guizhouensis
Pathway
led03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
led00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBK82_28645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
led03019
]
BBK82_28645
03009 Ribosome biogenesis [BR:
led03009
]
BBK82_28645
Enzymes [BR:
led01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BBK82_28645
Messenger RNA biogenesis [BR:
led03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BBK82_28645
Ribosome biogenesis [BR:
led03009
]
Prokaryotic type
rRNA helicases
BBK82_28645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
WSD
Motif
Other DBs
NCBI-ProteinID:
ANZ39428
UniProt:
A0A1B2HNY1
LinkDB
All DBs
Position
complement(5836599..5838260)
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AA seq
553 aa
AA seq
DB search
MTTADNGFADLGLRPDILNALTTLGYEEPTPIQSEAIPPLLAGNDLLGQAATGTGKTAAF
ALPLLERIADRIGKGEKPLALVLAPTRELAVQVSEAVHRYGRHLGTRVLPIYGGQPIGRQ
LRELSRGIDVVVATPGRAIDHLQRGTLQLGDLQVVVLDEADEMLDMGFAEDIDAILTETP
ADRQTVLFSATMPPRIDRMAKSHLREPVLIQIEREKTEPGEAPRVRQTAYLVRREHKPAA
LGRVLDVEAPTAAVVFCRTRDEVDQLTETLNGRGYRAESLHGGISQEQRDRVMARLRSGT
ADLLVATDVAARGLDIEQLTHVVNYNVPSAPEAYTHRIGRVGRAGREGVAITLVEPRENS
MLKTIERVTKTKIPMEKVPTVADLRARQLELTRSSLQESLMEDDLSRFRVVVETLADEFD
VMDIALAAVKLAHEASGAAADEEEIPEVRPREDRPRRDGAPAGPRRERRGPSEGMTRLFL
GAGRSSGIRPQDIVGAITGETTLKGRDIGAIEIADRFSLVEVPGPEANSVIEQLRDATIK
GKRITIRRERQPR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgccgacaacggtttcgccgacctggggctgcggcccgacatcctcaacgca
ctcaccacgctgggctacgaggagccgacgccgatccagagcgaagcgatcccgcccctg
ctcgcgggcaacgacctgctgggccaggcggccacgggcaccggcaagacggcggcgttc
gcgctgccgctgctcgaacgcatcgccgaccggatcggcaagggcgagaagccgctggct
ctcgtgctcgccccgacccgtgagctggccgtgcaggtgtccgaggcggtccaccgctac
ggacgccacctgggcacgcgcgtgctcccgatctacggcggccagcccatcggccgccag
ctgcgcgagctgtcccgcggcatcgacgtggtggtcgcgacccccggccgcgcgatcgac
cacctgcagcgcggcacgctccagctcggcgacctgcaggtcgtcgtgctcgacgaggcc
gacgagatgctcgacatgggcttcgcggaggacatcgacgcgatcctcaccgagaccccg
gccgaccggcagaccgtgctgttctcggccacgatgccgccgcgaatcgaccgcatggcc
aagagccacctgcgcgagccggtgctgatccagatcgagcgcgagaagaccgagccgggc
gaggcaccccgcgtccggcagaccgcgtacctcgtgcgccgcgagcacaagccggccgcg
ctgggccgcgtgctggacgtggaggcaccgaccgccgctgtcgtgttctgccgcacgcgt
gacgaggtcgaccagctcaccgagacgttgaacggccgcggctaccgcgccgagtcgctg
cacggcggcatcagccaggagcagcgcgaccgggtcatggcccgcctgcgctccggcacc
gccgacctgctggtcgccaccgacgtggccgcgcgtggcctcgacatcgagcagctcacg
cacgtcgtgaactacaacgtgccgtccgcgcccgaggcctacacgcaccgcatcggccgg
gtcggccgcgcgggccgtgagggcgtcgcgatcacgctggtcgagccgcgcgagaactcg
atgctcaagacgatcgagcgcgtcaccaagaccaagatcccgatggagaaggtgccgacg
gtcgccgacctgcgcgcccgccagctggagctcacccgctcgtcgctgcaggagtcgctg
atggaggacgacctctcgcgcttccgcgtggtcgtcgagaccctcgccgacgagttcgac
gtgatggacatcgcgctcgccgccgtgaagctcgctcacgaggcctccggtgccgccgcc
gacgaggaggagatccccgaggtccgcccgcgcgaggaccgcccgcgccgcgacggtgcc
ccggcaggcccccgccgcgaacgccgcggcccgtccgagggcatgacgaggctgttcctc
ggcgctggccgctcctcgggcatccgcccgcaggacatcgtgggcgccatcaccggcgag
acgaccctgaagggccgcgacatcggcgcgatcgagatcgcggaccgcttctccctggtc
gaggtgccgggcccggaagcgaacagcgtgatcgagcagctgcgcgacgcgacgatcaag
ggcaagcgcatcacgatccgccgcgagcgccagccgcgttaa
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