Lentzea guizhouensis: BBK82_36300
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Entry
BBK82_36300 CDS
T04448
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
led
Lentzea guizhouensis
Brite
KEGG Orthology (KO) [BR:
led00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
led03019
]
BBK82_36300
Enzymes [BR:
led01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BBK82_36300
Messenger RNA biogenesis [BR:
led03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BBK82_36300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
WHD_HA2
AAA_23
T2SSE
nSTAND_NTPase5
AAA_25
nSTAND3
ABC_tran
NACHT
AAA_30
SLFN-g3_helicase
AAA_16
PhoH
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ANZ40654
UniProt:
A0A1B2HSF3
LinkDB
All DBs
Position
7562546..7566427
Genome browser
AA seq
1293 aa
AA seq
DB search
MDTPLAELHKRLPELMPRDQRRLARRLDGARKVKDPMARRKITEEIAGLIDEAALKVALR
RESVPKISYPDELPVSQHKDEIKELIARHQVVIVAGETGSGKTTQLPKICLELGRGITGQ
IGHTQPRRIAARTVAERVAEELGTKLGDTVGYKVRFTDQSGEDTLVKLMTDGILLAEIQT
DRTLSRYDTIIIDEAHERSLNVDFLLGYLKQLLPRRPDLKIVITSATIDPQRFSAHFDDA
PVIEVSGRTYPVETRYRPLEEDDDQTQGIINAVHELQAEGPGDVLVFLSGEREIRDTADA
LKAEDLKNTEILPLYARLSVGEQHRVFQRHTGRRIVLATNVAETSLTVPGIKYVVDPGNA
RISRYSHRLKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDFEARPEFTDAEIL
RTNLASVILQMTNIGLGDVARFPFIDPPDSRNINDGIGLLQELGAISADRKAAGEQTLTP
TGRKLAQLPVDPRLGRMVLEADTTGCLKEVMIIAAALSIQDPRERPADQQDAATQQHARF
VDKESDFVTFLTLWQYLKDKQKELSGNQFRKLCKAEFLNYLRVREWQDIYLQLRQVAKQI
GMTLNDTPGDPRNIHIALLSGLLSHIGVKDVLKKQAPNEKRRPLTEFLGARNAKFAIFPG
SALAKKPPQWVMAAELVETSRLWGRIVAKIEPEWAERLGEHVVKRQYSEPHWETKRGSVV
ALEKVTLYGVPIVAGRKVNYGRIDPGLSRELFLRHALVQGEWTTHHRFFHTNRALLEEVG
ELENRARRRDIVVDEETLYDFYDKRVGQDVVSARHFDTWWKKQKDKNLLTFTKDMLVNDR
ADVRPEAYPDQWRQGELTLPLSYHFEPGTKNDGVTVQLPLPALTTLDDDAFSWQIPGLRH
DLVVALIRSLPKQIRRNFVPVPDVATAVLARINPADTSLLAGVERELKALTGVTVHREDW
QLDAVPDHLKLTFQVVDENNRTLAEGKDIAALKTQLRDEVRESLSQAAGHLERTGLTTWD
FDTLPRTIEQRQSGITVTAYPSLLDRGDTVAIKVLDTPGRQAHAHRRGVRRLLLLNLNSP
VKHLQRHLDNASKLALTRNPHGGVANLLADCITAAVDRLMGEPAWDQKSFAAQLKKVQAA
LNDTTWVTVQEVRKVLEAAHEAELTLTSLKGAPDSVNDIRGQLDSLVYKGFVTHTGYDRL
PDLVRYLKGISRRIEKLPENPRRDLEWTHQVHQVHAEYRDLRAQIPADEPAPELDEIRWM
IEELRLSYFAQTIGTRYTVSDKRIYKALDAVPL
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atggacaccccgctcgctgaactgcacaaacgcctgcccgagctcatgccgcgtgatcaa
cgccggctcgccaggcgcctcgacggcgcacgcaaggtcaaagacccgatggcgcgccgc
aagatcacagaggagatcgccggcctcatcgacgaggccgcgctcaaggtcgcgctgcgc
agggagtccgtcccgaagatcagctatcccgacgagctgccggtcagccagcacaaggac
gagatcaaagagctgatcgcgcgccaccaggtcgtgatcgtcgccggggagaccgggtcc
ggcaagacgacccagctgccgaagatctgcctggagctcgggcgggggatcaccgggcag
atcgggcacacccagccccgccgcatcgccgcgcgcaccgtcgccgaacgggtcgccgag
gagctgggcaccaagctcggggacacggtcgggtacaaggtgcggttcaccgaccagtcc
ggcgaggacacgctggtcaagctcatgaccgacggcatcctgctcgccgagatccagacc
gaccgcacgctgtcgcgctacgacacgatcatcatcgacgaggcccacgaacgcagcctc
aacgtcgacttcctgctcggctacctcaagcagctgctgccgcggcgaccggacctgaag
atcgtcatcacgtccgcgacgatcgacccgcagcggttcagcgcgcacttcgacgacgcg
cccgtcatcgaggtctccggccgcacctaccccgtcgagacccgctaccggccgctggag
gaggacgacgaccagacccagggcatcatcaacgccgtccacgagctgcaggccgaaggc
cccggcgacgtcctggtgttcctctccggcgaacgcgagatccgcgacaccgccgacgcc
ctcaaagccgaagacctgaagaacaccgagatcctgccgttgtacgcgcggctcagcgtc
ggtgagcagcaccgcgtcttccagcgccacaccggccgccggatcgtgctcgccaccaac
gtcgccgagaccagcctcaccgtgccgggcatcaagtacgtcgtcgaccccggcaacgcg
cgcatctcccgctacagccaccgcctcaaggtccagcgcctgcccatcgaacccatcagc
caggcgagtgcgaaccagcgcaagggccgctgcggccgcgtcagcgaaggcatctgcatc
cgcctgtactccgaggaggacttcgaggcccgtccggagttcaccgacgcggagatcctg
cgcaccaacctcgccagcgtcatcctgcagatgaccaacatcggcctcggcgacgtcgcc
aggttcccgttcatcgacccgcccgacagccgcaacatcaacgacggcatcggcctgctc
caggagctcggcgccatcagcgccgaccgcaaggccgcgggggagcagacgctcaccccc
accggccgcaagctcgcccagctgcccgtcgacccccgcctcggccgcatggtcctggag
gccgacaccaccggctgcctcaaagaggtcatgatcatcgccgccgcgctgtccatccag
gacccccgcgaacggcccgccgaccagcaggacgccgccacgcagcagcacgccaggttc
gtcgacaaggaatccgacttcgtcacgttcctcaccctgtggcagtacctcaaggacaag
cagaaagagctcagcggcaaccagttccgcaagctctgcaaggccgagttcctcaactac
ctgcgcgtgcgcgagtggcaggacatctacctgcagctgcgccaggtcgccaagcagatc
ggcatgaccctcaacgacacccccggcgacccgcgcaacatccacatcgcgctgctctcc
gggctgctcagccacatcggcgtcaaagacgtcctcaaaaagcaggccccgaacgagaaa
cgccggccgctgaccgagttcctcggcgcccgcaacgccaagttcgcgatcttccccggc
agcgcgctggcgaagaaaccaccgcaatgggtgatggccgccgagctcgtcgagaccagc
cgcctgtggggccgcatcgtcgccaagatcgaacccgagtgggccgaacgcctcggcgag
cacgtcgtcaaacgccagtactccgaaccgcactgggagaccaaacgcggcagcgtcgtc
gccctggagaaggtcaccctctacggtgtgccgatcgtcgccggccgcaaggtcaactac
ggccgcatcgaccccgggctgtcgcgtgagctgttcctgcgccacgcactcgtacagggg
gagtggaccacccaccaccggttcttccacaccaaccgcgccctgctggaggaggtcggg
gagctcgagaaccgggcgcggcgccgcgacatcgtcgtcgacgaggaaaccctctacgac
ttctacgacaaacgcgtcggccaggacgtggtctccgcgcggcacttcgacacctggtgg
aagaagcagaaggacaagaacctcctcaccttcaccaaggacatgctggtcaacgaccgc
gccgacgtccgccccgaggcctaccccgaccagtggcgccagggcgagctgaccctgccg
ctgagctaccacttcgaacccggcacgaagaacgacggtgttaccgtccagctgccgctc
ccggcgctcaccaccctggacgacgacgcgttctcctggcagatccccggcctgcgccac
gacctcgtcgtcgccctcatccggtcactgcccaagcagatccgccgcaacttcgtgccc
gtccccgacgtcgccaccgccgtcctcgcccgcatcaaccccgccgacacgagcctgctc
gccggggtcgaacgcgagctcaaagccctcaccggcgtcaccgtgcaccgcgaggactgg
cagctcgacgccgtccccgaccacctcaagctcaccttccaggtcgtcgacgagaacaac
cgcaccctcgccgagggcaaggacatcgccgcgctcaagacccagctgcgcgacgaggtc
cgcgagtcgctgtcccaagccgccgggcacctcgaacgcaccgggctgaccacctgggac
ttcgacaccctgccccgcaccatcgagcagcggcagtccggcatcaccgtcaccgcctac
ccgtcgctgctcgaccgcggcgacaccgtggcgatcaaggtcctcgacacccccggccgg
caggcccacgcgcaccgccgcggtgtgcgcaggttgttgctgctcaacctgaactcaccg
gtcaagcacctgcaacgccacctcgacaacgcctccaagctcgccctgacccgcaacccg
cacggtggggtggcgaacctgctcgccgactgcatcacggccgcggtcgaccggctcatg
ggcgaacccgcgtgggaccagaagtcgttcgccgcccagctcaagaaggtccaggccgcg
ctcaacgacaccacctgggtgaccgtgcaggaggtccgcaaggtcctcgaagccgctcac
gaggccgagctcacgctcacctccctcaagggcgcccccgactcggtcaacgacatccgc
ggccagctcgactcgctggtgtacaaggggttcgtcacccacaccggctacgaccggctg
ccggacctggtccgctacctcaagggcatctcccggcgcatcgagaagctgcccgagaac
ccgcgccgcgacctcgagtggactcaccaggtccaccaggtccacgccgagtaccgcgac
ctgcgcgcccagatcccggccgacgaacccgcgcccgagctcgacgagatccgctggatg
atcgaggaactgcggctgtcctacttcgcccagaccatcggcacccgctacaccgtcagc
gacaaacgcatctacaaggcactcgacgccgtccccctgtga
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