Leclercia sp. W17: DVA44_01095
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Entry
DVA44_01095 CDS
T05987
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
lee
Leclercia sp. W17
Brite
KEGG Orthology (KO) [BR:
lee00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
DVA44_01095
Enzymes [BR:
lee01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
DVA44_01095
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Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
Motif
Other DBs
NCBI-ProteinID:
AXF62838
LinkDB
All DBs
Position
222677..224680
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AA seq
667 aa
AA seq
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MLRVSRSLTIKQMAMVTAVTMVFVFVFCVILLFHAIQQNRYNTATQLESIARSIREPLSA
AILKGDIPQAESIIKSIKPAGVVSQADVVLPNQFQALRMNFIPEHPVPVMMKRLFEMPVQ
ISLPVYSLQRPANPQPLAYLVLQSDSWRMYKFVISWISTLVTTYLLLTLMLTVALTWCIN
RLIVHPLRRIARELDTLSPQQQVGHQLALPRLHHDDEIGMLVRSYNLNQQRMMRQHDELN
HNATRFPVSELPNKAFLMVMLEQAVKRQQTMALMVVACETLQDTAGVLKESQREMVLLTL
VEKLKSVLAPRMVLTQVSGYDFVIIANGVKEPWHAITLGQQVLTVINERLPVQGIQLRPS
ASIGIAMFYGNLTAEQLYRRAFSAAFTARQKGKNQIQFFEPEQMEKAQQRLSEENDILTA
LDSNDFAIWLQPQVNLRTGKVHSAEALLRMRQPDGGWELPEGLIDRIENCGLIVTVGHWV
LEESCRLLSAWQSRGVMMPLSVNLSALQLMHPNMVPDLLALIHRYQIKPDTLMLEVTESR
RIDDPNEAVAILRPLRNAGVRIALDDFGMGYAGLRQLQHMKTLPVDVLKIDKAFVEGLPE
DSSMVEAIIQLARSLKLEIIAEGVETEAQRQWLADAGVECGQGYLFDKAVPGDIFESRYF
KRANADD
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
attttgcgtgtcagccgctctttaactatcaaacaaatggcgatggtcactgccgtcacc
atggtgtttgttttcgtcttttgcgtcattttgctgtttcatgccattcagcagaatcgc
tacaacacggctacgcaactcgagagcattgcccgctcaatccgtgagcccctctctgcc
gccattctgaagggtgatattcctcaggcggagtccattattaaaagcattaagccagca
ggggttgtcagccaggcggatgtcgtgctgccgaatcagtttcaggcgttacgcatgaac
tttatcccggagcatccggtaccggtgatgatgaaacgcttgtttgaaatgccggtgcag
atctcccttccggtctattcgttgcagcgtccggcaaacccgcagccgctggcctatctg
gtgctccagtctgactcctggcgaatgtacaaatttgtcatcagttggatctcaacgttg
gtaaccacttacttattgttgacgctgatgcttaccgtggcgctgacctggtgcattaac
cgtctcatcgttcatccgctgcgtcgcattgcccgggagcttgatactctctcgccgcag
caacaggtggggcaccagcttgctctgccgcgtctgcatcacgacgacgaaattggcatg
ctggtccgcagctacaacctcaaccagcagcgcatgatgcgccagcacgatgagctcaac
cacaatgccacccgtttcccggtgtcggaactgccgaacaaggcgtttctgatggtgatg
ctggagcaggccgtgaagcggcagcagaccatggcgctgatggtagtggcctgtgaaacg
ttacaggataccgctggcgtgctgaaagagagtcagcgagagatggtcttactgacgctg
gtcgaaaagctgaaatccgtgcttgcaccacggatggtactgacgcaggtgagcggctac
gactttgtgattatcgccaatggcgttaaagagccgtggcatgccatcacattaggtcag
caagtgcttactgttatcaatgagcggttgccggttcaggggatccagctgcgcccgagc
gccagcatcggtatcgccatgttttacggcaacctgaccgcagaacagctctatcgccgg
gcattttccgccgcgtttaccgcccgccagaagggtaagaatcagattcagttcttcgaa
cccgagcagatggagaaagcgcagcagcggctctcagaagagaacgacatcctgaccgcg
ctagacagcaacgatttcgccatctggctgcagccgcaggtcaatctgcgtaccggtaag
gtccatagcgccgaagcgctgttgcggatgcgtcagcccgacggcggctgggagcttccg
gaagggctgattgaccgtattgaaaattgcggcctgattgtgacggtgggtcactgggtg
ctggaagagtcctgccgtttgctgtcagcctggcagtcgcgcggggtgatgatgccgctg
tcggttaacttatcggccttgcagctgatgcatcccaacatggttccggatctgctggcg
ttgattcaccgctaccagatcaagccggacaccctgatgctggaagtgaccgagagccgc
cggattgacgatcctaacgaagcggtggcgatacttcgcccgctgcgtaacgccggggtc
cgtatcgcgctggacgactttggcatgggatacgctggcctgcgtcaattgcaacatatg
aaaaccctgccggtagatgtgctgaagattgataaggcctttgtggaggggctaccggaa
gacagcagcatggtcgaggcaattatccagctggcgcgcagcctgaagctggaaattatc
gctgaaggtgtcgaaaccgaagctcagcgccaatggctggccgatgccggggtggaatgc
ggccagggatatcttttcgacaaagccgttccgggtgatatttttgagagccgttatttt
aaacgcgctaatgctgatgactga
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