Leclercia sp. W17: DVA44_02840
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Entry
DVA44_02840 CDS
T05987
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lee
Leclercia sp. W17
Brite
KEGG Orthology (KO) [BR:
lee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lee03016
]
DVA44_02840
Enzymes [BR:
lee01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DVA44_02840
Transfer RNA biogenesis [BR:
lee03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DVA44_02840
Prokaryotic type
DVA44_02840
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AXF63148
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All DBs
Position
560259..561203
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGASSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGQVVEERPVTFSSEQLDAALESFRGDTQ
QVPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGDELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPAERMVTLEQLQALVDQAQEQGTEAADLLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTTNVPAQGLVRVTEGDDNTFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacgtgcacggcgtgctgctgctggataaaccg
cagggtgcatccagcaacgacgtgctgcaaaaagtaaagcgtatatataacgccaaccgc
gcggggcacaccggggcgctggatccgctggcgaccggtatgctgccgatttgtctgggt
gaagcgaccaagttttcccaatatctgctggattcggacaaacgctaccgcgtgattgcc
aagcttggccagcgcacggacacttccgatgctgatggtcaggtcgtcgaagagcgtccg
gtgacgttcagcagcgaacagcttgatgccgcgctcgagagcttccgtggcgatacccaa
caggtgccgtccatgtactcggcactgaagtaccaaggcaaaaagctctacgagtatgcg
cgtcagggaattgaggtgccacgcgaggcccgtccgattacggtctatgagctgctgttc
attcgtcacgaaggcgatgagctggagctggaagtgcattgctcaaaaggcacctatatc
cgcaccatcatcgacgatctgggtgagaagctgggctgtggcgcgcacgttatttatctg
cgccgtctggcagtcagcaagtacccggctgaacgtatggtgacgctggagcagctgcag
gcgctggtggaccaggcgcaggagcagggcacagaggcggcggatctgcttgacccctta
ctgatgccaatggacagtcctgcttcggactatccggttgtcaatctgccgttgacctcc
tccgtttactttaaaaacggcaacccggtgcgtacgacgaatgtcccggcacaagggctg
gtgcgcgttacggaaggggatgacaacaccttcatcgggatgggtgaaatcgacgacgaa
ggtcgtgttgccccacgccgtctggtggttgaatatccggcataa
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