Leclercia sp. W17: DVA44_04530
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Entry
DVA44_04530 CDS
T05987
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
lee
Leclercia sp. W17
Pathway
lee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DVA44_04530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lee03019
]
DVA44_04530
Messenger RNA biogenesis [BR:
lee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DVA44_04530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AXF63452
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All DBs
Position
896438..896968
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AA seq
176 aa
AA seq
DB search
MIDDDGYRPNVGIVICNRQGQVMWARRYGQHSWQFPQGGINPGESAEQAMYRELFEEVGL
SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSSDADINMQTSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASAVMMLQEVPPKPQSAPAWRRKRG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgacgatggctaccgcccgaatgtaggtatcgtaatttgtaatcgccagggg
caggtcatgtgggcccggcgatatggtcagcactcctggcaatttccccaaggcgggatt
aaccctggagagtccgcagagcaagcgatgtatcgggagctgttcgaagaagttggctta
agccgcaaggatgttcgcattctggcttcgacccgcaactggttgcgttacaagttaccg
aagcgtttggtgcgttgggacacaaagccggtatgtatcggccagaaacagaaatggttt
cttctgcaattggtgagcagcgatgcggatatcaatatgcaaaccagcagcacgcctgag
tttgatggctggcgctgggtcagctactggtatcccgttcggcaggtcgtgtcgtttaag
cgcgatgtttaccgtagggtgatgaaagagttcgcaagtgccgtaatgatgcttcaggag
gttcctcctaagccccagagcgcacctgcctggcgacgtaaaagaggttaa
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