Leclercia sp. W17: DVA44_04585
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Entry
DVA44_04585 CDS
T05987
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lee
Leclercia sp. W17
Pathway
lee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DVA44_04585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lee03400
]
DVA44_04585
Enzymes [BR:
lee01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DVA44_04585
DNA repair and recombination proteins [BR:
lee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DVA44_04585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Helicase_RecD
Viral_helicase1
SH3_13
AAA_11
AAA_22
UvrD-helicase
SLFN-g3_helicase
MukB
nSTAND3
AAA_16
AAA_28
UvrD_C
PhoH
DO-GTPase1
Herpes_Helicase
CbiA
T2SSE
ATPase
Phageshock_PspD
DEAD
Mg_chelatase
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AXF63463
LinkDB
All DBs
Position
912946..914766
Genome browser
AA seq
606 aa
AA seq
DB search
MTMQEHLLEAVEERVLRRLDVQFAMMVAGNDEPAVMLAAAILSRDAGEGHVCLPLSRLRA
EAKSAALQACFALFDEEPDWTATLLRSRAVSAGDEPTPLVLTGERLYLNRMWRYERAVAR
FFSEANQPLPHDSADVQRTLNALFTSDEAVNWQKVAAAVALTRRISVISGGPGTGKTTTV
ARLLAALIQMAGEEKCRIRLAAPTGKAAARLTESLGGALQKLPLTEAQRARFPTEASTLH
RLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLTMMSRLIDALPPHARVIFLGDRDQL
ASVEAGAVLGDICTWASAGFTVRRAQELASMTGCEMQGNVSPVAGALRDSLCLLQKSYRF
GSDSGIGQLAAAVNRGDRHAIRSVFDGKFSDIEKKQLQSGEEYLAMLEDALQGYQHFLDS
VQQQASEAEILAAFGRYQLLCALRDGPFGVAGLNERLEQVLAQKRRIGRQPHSRWYEGRP
VMISRNDSALGLFNGDIGIALDRGQGLRVWFQMPDGSVKSVQPSRLPEHETAWAMTVHKS
QGSEFDHAALILPNQMSPVVTRELVYTAITRARRRLSLYADEGVLTQAVTIRTERRSGLS
AIFEAL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcaggaacacttgctggaagccgtagaggagcgcgtgctgcgtcgtctggat
gtacagtttgcgatgatggtagcagggaacgacgaaccggcggtgatgctggcggcggcg
atattaagccgtgatgcgggagaagggcacgtttgcctgccgttgtcccgactgcgtgcc
gaggcgaaaagcgccgcgctgcaggcctgttttgcgctgtttgacgaagagccggactgg
accgctacgctgctgcgctcccgcgcggtgagtgcaggggatgaaccgacgccgctggtg
ctcaccggcgagcggctctacctcaaccggatgtggcgctatgagcgggcggtggcccgc
ttctttagcgaagccaatcagccgttgccccatgacagcgccgacgttcagcgcacgctg
aatgcgctgtttacctctgatgaagccgtcaactggcaaaaggtggctgcggcagtcgcg
ttaacgcggcgtatttccgtgatttccggcggaccggggaccggcaaaacgaccaccgtt
gcccgcctgctggcggcgctgatccagatggcgggagaggagaaatgccggatccggctg
gcggcccccaccggtaaagcggccgctcgtctgaccgaatcgctgggcggcgcgctgcaa
aaactgcccctgaccgaggcccagcgcgcgcgattcccgacggaagcgagcacgctgcac
cgtttgcttggcgcgcagccgggcagccagcgcctgcgttaccatgcaggtaatccgctg
cacctggatgtgctggtggtggatgaggcgtcgatgattgacctgacgatgatgtcgcgt
ctgattgacgccctgccgccccatgcccgggttattttcctcggcgatcgcgaccagctg
gcctccgtcgaagcgggcgcggtactgggtgacatctgtacctgggccagcgccggcttt
acggtccggcgcgcgcaggagcttgccagcatgacgggatgtgagatgcagggcaacgtc
agcccggtcgcgggtgcgctacgcgacagcctgtgcctgctgcaaaaaagctaccgtttt
ggcagcgattctggcatcgggcaactggcggccgcggtcaaccggggcgatcgccacgct
atccgctcggtatttgatggcaaattcagtgatattgagaaaaagcagcttcagagcggg
gaagagtatctggcgatgctggaagatgccctgcaggggtatcaacattttctcgacagc
gtgcagcagcaggcctccgaagcggagatcctggcggcatttggccgctaccagctgctt
tgcgccttacgggatggccccttcggcgtcgccgggcttaacgaaaggctcgagcaggtc
ctggcgcaaaaacgccgtattggccgtcagccccattcgcgctggtatgaaggcaggccg
gtgatgatttcacgcaacgacagcgcgctgggcctgtttaacggcgatatcgggattgcg
ctggatcgtggtcagggtctgcgggtctggttccagatgccggacggcagcgtgaagtcc
gtgcagcccagccgcctgccggagcatgaaaccgcctgggccatgacggtgcataaatcc
cagggctctgagttcgatcacgcggcgctgattttacctaaccagatgtcgcccgtcgtg
acccgcgagctggtctataccgccattacccgcgcccgtcggcgtttgtcgttgtatgcg
gatgaaggggtgctgacccaggctgtcaccatccgtacggagcggcgcagcgggctgagc
gcgatctttgaagccttataa
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