Leclercia sp. W17: DVA44_04850
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Entry
DVA44_04850 CDS
T05987
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lee
Leclercia sp. W17
Brite
KEGG Orthology (KO) [BR:
lee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lee03016
]
DVA44_04850
Enzymes [BR:
lee01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
DVA44_04850
Transfer RNA biogenesis [BR:
lee03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DVA44_04850
Prokaryotic type
DVA44_04850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AXF63510
LinkDB
All DBs
Position
970898..971947
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AA seq
349 aa
AA seq
DB search
MTDFDNLTYLHGKPQGTGLLKANPEDFRVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGNGMPDLSQFQLEGCQVLEYARHKRK
LRLGALKGNAFTLVLREVSHRDEVEQRLNAIQAQGVPNYFGAQRFGIGGSNLQGALRWAQ
SNAPVRDRNKRSFWLSAARSALFNQIVSERLKKTDANQVVVGDALQLAGRGSWFVATDEE
LRDVQARVEAKTLMITAALPGTGDWGPQGDALRFEQSAIADETELCSLLVREKVEAARRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTSGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacggacttcgacaacctgacctacctgcacggtaaaccgcagggcacggggctgctg
aaagccaacccggaagattttagggtcgtcgaggatctgggtttcgagccggatggcgag
ggcgagcatattctggtgcggatcctgaaaaacggctgcaacacccgttttgtggccgat
gcgctggcaaagttcctgaaaattcacgcccgtgaagtgagcttcgccgggcagaaagac
aaacacgccgtgacggaacagtggctctgcgcgcgggtgccgggtaatgggatgcctgac
ttaagccagttccagctcgaaggctgtcaggtactggaatacgcccgccataagcgcaag
ttgcgcctcggcgcgttaaagggcaatgcttttaccctggtgctgcgcgaggtgagccac
cgcgacgaggtggagcaacgtcttaacgccatccaggcgcaaggggtgccgaactacttt
ggcgcgcagcgttttggcatcggcggcagtaacctgcagggggcgctgcgctgggcgcag
agcaatgctccggtgcgcgatcgcaataaacgcagtttttggttgtcggcagcccgcagt
gcgttgtttaatcaaatcgtcagcgagcgactgaaaaaaacagacgcgaatcaagttgtt
gtcggcgatgcgctacaattagcgggacgcggcagctggtttgtcgccactgacgaagag
ctgcgcgatgtgcaggcgcgcgtcgaggcaaaaacgctgatgatcactgcggccctgccg
ggtaccggcgactggggtccgcagggtgatgcgctgcgctttgaacagtctgccatcgcc
gatgaaacagagttatgctcactgctggtgcgggaaaaagtcgaagcggcacgccgggcg
atgctgctctatccgcaacagttgagctggaactggtgggatgacgtaaccgtcgagcta
cgtttctggctgccggcaggcagctttgccaccagtgttgtcagggaacttatcaacact
tcgggtgactatgcgaatattgctgagtaa
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