Leclercia sp. W17: DVA44_10430
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Entry
DVA44_10430 CDS
T05987
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lee
Leclercia sp. W17
Brite
KEGG Orthology (KO) [BR:
lee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lee03032
]
DVA44_10430 (topA)
03400 DNA repair and recombination proteins [BR:
lee03400
]
DVA44_10430 (topA)
Enzymes [BR:
lee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DVA44_10430 (topA)
DNA replication proteins [BR:
lee03032
]
Prokaryotic type
DNA Topoisomerases
DVA44_10430 (topA)
DNA repair and recombination proteins [BR:
lee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DVA44_10430 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
DUF4795
Motif
Other DBs
NCBI-ProteinID:
AXF64498
LinkDB
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Position
2109923..2112517
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AA seq
864 aa
AA seq
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MGKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTSGSAKKSADSTSTKGAKKPKK
DERSALVNRMGVNPWDNWQAQYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIAW
HLREVIGGDDTRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVSP
LLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEVDASVTTPGGDTLPLEVSHQ
NDKPFRPENREQTMAAVALLEKARYQVLDREDKPTSSKPGAPFITSTLQQAASTRLGYGV
KKTMMMAQRLYEAGHITYMRTDSTNLSQDAVNMVRDYIGDNFGKKYLPESANQYNSKENS
QEAHEAIRPSDVSVLAESLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVGAGDFR
LKARGRILRFDGWTKVMPALRKGDEDKTLPAVNAGDELTLVELTPAQHFTKPPARFSEAS
LVKELEKRGIGRPSTYASIISTIQDRGYVRAENRRFYAEKMGEIVTDRLEDNFRELMNYD
FTAQMENSLDQVANHEAEWKKVLDSFFSDFTKQLDKAEKDPEEGGMQPNQMVLTSIDCPT
CGRKMGIRTATTGVFLGCSGYALSPKERCKTTINLVPENEVLNVLEGDDAETNALRAKRR
CNKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHLK
MGRFGKYMACTNDDCKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVFL
AANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDAEGNKTVVRFSRKTKQQYVA
AEKEGKATGWSAFYVDGKWVEGKK
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgttatcgttgagtccccggcaaaagccaaaacgatcaataagtat
ttgggtagtgactacgtggttaagtccagcgtcggtcatatccgcgatctgccgaccagt
ggctcagccaagaagagcgccgactctacctccaccaaaggggccaaaaagcctaaaaag
gatgaacgtagcgcgctcgtaaatcgcatgggagttaacccatgggataactggcaggca
cagtacgaagtactgccgggtaaagagaaagtcgtctccgagctgaaacagctggcggaa
aaagccgaccacatctatctcgcaaccgaccttgaccgcgaaggggaggccattgcatgg
catctgcgggaggtgatcgggggcgatgacacacgctatagccgcgtagtgtttaacgaa
attacaaaaaacgcgatccgccaggcgtttgaaaagccgggtgagctgaatatcgaccgc
gtcaacgctcagcaggcacgccgctttatggaccgcgtcgtgggttacatggtttctcca
ctgctgtggaaaaagattgcgcgtggactttccgcaggccgcgtacagtctgttgccgtg
cgtctggtggttgaacgggaacgcgaaatcaaagcgttcgtgccagaagagttctgggaa
gttgacgccagcgtgaccacgccgggcggcgacaccttgccgctggaagtttcgcaccag
aacgataagccgttccgtcctgaaaatcgcgaacagaccatggccgcggtagcgctgctg
gaaaaagcgcgctatcaggtactggatcgtgaagacaaaccgaccagcagcaaacctggc
gcaccgtttatcacctccacattgcagcaggcggccagcacccgtctgggctatggcgtg
aaaaaaaccatgatgatggcgcagcgtctgtatgaagcgggtcacatcacctatatgcgt
actgactctaccaacctgagccaggacgccgtcaacatggtgcgtgattacattggcgac
aattttggtaagaaatacctgccggaaagcgccaatcagtacaacagcaaagagaactcc
caggaagcgcacgaagcgattcgtccttctgacgtctctgtgctggcggaatcccttaag
gatatggaagccgatgcgcaaaaactgtatcagctgatctggcgccagtttgttgcctgt
cagatgacccctgcgcagtatgactccaccacgctgaccgtcggcgcgggcgatttccgc
ctcaaggcgcgtggccgtatcctgcgtttcgatggctggaccaaagtgatgcctgcgctg
cgtaagggtgatgaagataaaaccctgccagcggtcaacgccggggatgaacttaccctg
gttgaactgaccccggcccagcactttaccaagccgccggcacgcttcagcgaagcctcg
ctggtgaaagagctggaaaaacgtggtatcggtcgtccgtcgacctatgcgtcgatcatc
tcgaccattcaggatcgtggctatgtgcgcgcggaaaaccgccgtttctatgcggagaaa
atgggtgaaattgtcaccgatcgcctggaagataacttccgcgagctgatgaactacgat
tttaccgcgcagatggaaaatagcctggaccaggtggctaaccatgaagccgagtggaag
aaggtgctggacagcttcttcagcgacttcaccaagcagctggataaagcggaaaaagac
ccggaagaaggcggtatgcagccgaaccagatggtgctgaccagcatcgactgtccgacc
tgcggccgtaagatggggattcgtaccgccacgaccggtgtcttcctcggctgctcaggc
tatgcgttgtccccgaaggagcgctgcaaaaccaccatcaacctggtgccggaaaacgaa
gtgctgaacgtgctggaaggcgacgatgcggaaaccaacgcattacgcgccaaacgccgc
tgcaataagtgcggcacagcgatggacagctacctcatcgatccgaaacgtaagctgcat
gtctgtggtaacaacccgacctgcgacggttacgagattgaagagggtgagttccgcatc
aagggttatgacggtccgattgtggaatgcgagaagtgtggttctgaaatgcacctgaaa
atggggcgttttggtaagtacatggcctgcaccaatgacgactgcaaaaacacgcgtaag
atcctgcgtaacggtgaagtggcaccgccgaaggaagatccggtgccgttgccggagctg
ccgtgtgaaaaatccgatgcgtactttgtactgcgtgacggtgctgcgggcgtcttcctg
gcggcgaacaccttcccgaaatcgcgtgaaacgcgtgcgccgctggttgaagagctttac
cgcttccgcgatcgcctgccagaaaaactgcgttatctggccgatgcaccgcagcaggat
gcagaaggtaataagaccgttgtgcgttttagccgtaaaaccaagcagcaatatgtcgct
gctgagaaagagggtaaagccaccggctggtcagcattttatgttgacggcaaatgggtt
gaaggcaagaaatag
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