Leclercia sp. W17: DVA44_10505
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Entry
DVA44_10505 CDS
T05987
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
lee
Leclercia sp. W17
Pathway
lee02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lee00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DVA44_10505
Enzymes [BR:
lee01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
DVA44_10505
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
AXF64511
LinkDB
All DBs
Position
complement(2124526..2126517)
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AA seq
663 aa
AA seq
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MIDDLEQNLLFRYMGTHSPWWRLTADSNALHLAASESADTTQVVALNDEQANSIRQMTVI
TSSITMTLSLYGTEVPVHLVGRKINKKEWTGTASAWNDTPSVARDLAQGLSFAEQVVSEA
NSVIVILDRHGNIQRFNRLSEEYTGMKEHEVIGQNVFKLFMSRSEAAASRRNISVFFRDG
SSYEVERWIKTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAIHDLISEAIETRGDGQVGVVYLDLDNFKKVNDAYGHMFGDQLLQAVALAI
LSCLEDGQVLARLGGDEFIVLATGTSQGALEAMASRILTRLRQPFRIGLIEVYTGCSLGI
SLAPQHGTDRESVIRNADTAMYTAKENGRGKFCVFSPEMNQRVFEYLWLDTNLRKALDND
QLVIHYQPKITWRGEVRTLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVMLDVV
RQVAKWRDKGINLRVAVNVSARQLADQTIFSDLKQALKDLNFEYCPIDVELTESCLIENE
ELALSVIQQFSQLGAQIHLDDFGTGYSSLSQLARFPIDAIKLDQAFVRDIHKQSVSQSLV
RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGVNERQGFLFAKPMPAVAFERWFKRYQSR
NAR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgattgacgatctggagcaaaatttgctgtttcgttacatgggcacccacagtccctgg
tggcggctgacggcggacagtaacgcgctccatcttgcggccagcgaaagcgccgatacc
acacaggttgtggcgctgaatgacgagcaggccaacagcattcgccagatgacggttatt
acctccagcattaccatgacgctctccctctacggaaccgaggtgccagtgcacctggtg
ggacgtaagatcaataaaaaagagtggaccggtaccgcctccgcctggaacgacacccct
tccgtcgcccgcgatctggcgcaggggttatcctttgccgagcaggtggtttcagaggcc
aactcggtcatcgttattctcgaccggcacggcaatattcaacgcttcaaccgcctgagc
gaagaatataccgggatgaaagagcacgaggttatcggtcagaacgtctttaaactgttt
atgagccgcagcgaggcagcggcttcccggcgtaatatcagcgttttttttcgggacggc
agctcctatgaagtggaacgctggattaaaacccgtaaagggcagcgtttgtttttattc
cggaataaattcgtgcacagcggcagcggaaaaaatgaaatattccttatctgttccggt
acggatattactgaagaacgccgtgcccaggaacgtcttcgtgtacttgccaataccgac
accattactggcctgccaaaccgcaacgctatccacgatctgatcagcgaagcgatagaa
acccgtggcgatggtcaggtgggcgtggtctatcttgacctcgataatttcaaaaaagtg
aatgatgcctacgggcatatgtttggcgatcagctgctgcaggcggtggcgctggctatc
ctcagttgtctggaggacgggcaggtccttgcgcgtctgggtggcgacgagtttatcgtg
ctggcaaccggtacgtcacagggtgcgctcgaagctatggcttcgcggatcctcacccgc
ctgcgtcagcctttccggattggtttaattgaagtctacaccggctgttcgctggggatc
tccctcgccccccagcacggcaccgatcgggaaagcgtgatacgcaacgccgataccgcc
atgtataccgcgaaagagaatggccgcggcaagttctgcgttttctcgccggaaatgaat
cagcgcgtttttgaatatctgtggctggacaccaacctgcgcaaggcgctggacaatgac
cagctggtgatccactaccagcccaaaattacctggcgtggcgaggtgagaaccctcgaa
gcgctggtgcgttggcagtctccggagcgcggactgatcccaccgctggagtttatctcc
tacgccgaagagtccggactgattgttccgctcgggcgttgggtaatgctggatgtagta
cgccaggtggccaaatggcgcgataaaggcatcaatttacgcgtggcggtcaacgtttcg
gcccgccagctggcagaccagacgattttcagcgatctgaaacaggcgctgaaggatctc
aattttgaatactgccctattgatgtcgagctgaccgaaagctgtctgattgaaaacgaa
gagctggcgctgtcggtgatccagcagttcagccagctgggggcgcagatccaccttgat
gatttcggaaccggttattcctcgctgtcgcaactggcgcgttttcccatcgatgccatt
aagctcgaccaggcatttgtccgggatattcacaagcagtcggtgtcgcaatcgctggtg
cgcgcaatcgttgcagtcgctcaggcgctgaatttacaggtgattgccgaaggggtcgag
agtgcgaaagaagacgcctttctgacgaagaacggcgtcaatgaacgacagggatttctg
tttgctaaacccatgcccgctgtcgctttcgagcgatggtttaaacgttatcagtcacgg
aatgcgcgctag
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