Leclercia sp. W17: DVA44_10510
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Entry
DVA44_10510 CDS
T05987
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
lee
Leclercia sp. W17
Brite
KEGG Orthology (KO) [BR:
lee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lee03016
]
DVA44_10510
Enzymes [BR:
lee01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DVA44_10510
Transfer RNA biogenesis [BR:
lee03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DVA44_10510
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
AXF64512
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All DBs
Position
complement(2126838..2128772)
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AA seq
644 aa
AA seq
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MLQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
TAVIHSEKDRESAEPEELIEPFLTRFVGKVLRKDDRLSIIPDHPLLKDAIPCRAERGVTH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFGEDHFVPWWVTLARHNLEKEAPEGAAT
DMLDEGLERRDLTALNFVTIDSASTEDMDDALYVEEQADGKLLLTVAIADPTAWIAEGTP
LDDAAKIRAFTNYLPGFNIPMLPRELSDNLCSLRANEVRPVLACRMSIAADGTIEENIEF
FAALIESKAKLVYDEVSDWLENSGSWQPENEAIADQIRLLHRVCLSRSEWRKTHALVFKD
RPDYRFILGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGIYNVHTGFD
PANSEALAALLKTHDVHVDPQEVLTLNGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIVKGETIARPQDEATVQMAERRRLNRM
AERDVGDWLYARFLKDKAGTDTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGEVAYKVTEVIDVTIAEVRMETRSIIARPAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgctccaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgcca
cgtgctgaaggggtcgtaaaagccacggaaaaaggctttggcttccttgaagtcgatgcg
cagaaaagttacttcattccgcctccgcagatgaagaaagtgatgcacggcgatcgcatt
acggccgtgatccatagcgaaaaggatcgtgaatcagccgagcctgaagaattaattgaa
ccgttcctgacccgttttgtgggtaaggtgctgagaaaagatgaccgtctgtccatcatt
ccggaccatcctctgctgaaagacgccatcccctgccgcgctgagcgtggcgtgacgcat
gattttaaagaaggtgactgggccgtagcagaaatgcgccgtcaccctctgaagggcgat
cgcggtttttatgccgaactgacccagtttatcaccttcggcgaagaccatttcgtaccg
tggtgggtcacccttgcccgccataatctggaaaaagaggcgccagaaggcgcagcgact
gacatgctggacgaaggtcttgagcgtcgcgacctgactgccctgaattttgtcaccatc
gacagcgccagcaccgaagatatggacgatgcgctgtatgttgaagagcaggctgacggt
aaactgctgctaaccgtagcgattgccgatcctacggcctggatcgcagaaggcaccccg
ctggatgacgcggcgaaaatccgtgcctttaccaactatctgccgggcttcaacatcccg
atgctgccgcgtgaactgtcggataatctctgctccctgcgcgccaacgaagtgcgcccg
gtactggcctgccgcatgtccatcgctgccgatggcactatcgaagagaacattgagttc
ttcgctgcgctgattgagtctaaagccaagctggtgtacgacgaggtctctgactggctg
gaaaacagcggtagctggcagccagagaatgaggccattgccgatcagatccgcctgctg
catcgcgtctgcctgagccgtagcgaatggcgtaagacccatgcgctggtctttaaagat
cgccctgactaccgtttcattctcggtgaaaaaggcgaagtgctggatatcgtggcggag
ccgcgtcgcattgctaaccgcatcgttgaagagtcgatgattgcggcgaacatctgcgca
gcccgcgtactgcgcgacaaactcggtttcggtatctataacgtgcataccgggtttgat
ccggctaacagcgaagcgctggctgccctgctgaagacccatgacgtgcatgtggatccg
caggaagttctgaccctgaatggcttctgcaagctgcgccgtgaactggatgcccagcca
tctggtttcctggacagccgcattcgtcgcttccagtctttcgctgagatcagcaccgaa
cctggcccgcactttggcctggggctggaagcctacgccacctggacttcaccgattcgt
aagtatggcgatatgattaaccaccgcctgctgaaagcgatcgttaaaggcgaaaccatt
gcccgtccacaggacgaagccacggtgcagatggccgagcgccgtcgccttaaccgcatg
gcggaacgcgacgttggtgactggctctacgccaggttcctgaaagacaaagccggaacg
gatacccgtttcgcggcggagatcatcgatgtcagccgtggcggcatgcgtgtccgtctg
gtggataatggcgccgtggcctttattcctgcgccattcctgcacgccgtacgtgacgag
ctggtctgcagccaggaaaatggcaccgtgcaaatcaaaggcgaagtggcctataaagtg
actgaagttatcgatgtcactattgctgaagtgcgcatggaaacacgcagcattattgcc
cgccctgccgtctga
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