Leclercia sp. W17: DVA44_12090
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Entry
DVA44_12090 CDS
T05987
Name
(GenBank) HAMP domain-containing protein
KO
K05876
methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
Organism
lee
Leclercia sp. W17
Pathway
lee02020
Two-component system
lee02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
lee00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DVA44_12090
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
DVA44_12090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lee02035
]
DVA44_12090
Bacterial motility proteins [BR:
lee02035
]
Flagellar system
Chemotaxis proteins
MCPs
DVA44_12090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
TarH
HAMP
HAMP_2
Motif
Other DBs
NCBI-ProteinID:
AXF64794
LinkDB
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Position
2469629..2471179
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AA seq
516 aa
AA seq
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MSLKKSSLTILLALLFFFVASAATNVWLAIKSNNSLDNVNKEIQVVLSIIDPINHSRTLR
VRVMEYMKQVESGDTTGLDEKLASVKLALTKADGAFAAFNDAPRLADEAPLVKNYNDGWL
AYRDRGLVPLIEAASAHDKAKFDALIPQISGLDRQYEIVLDEVLSVHQKYAKQLNDDARS
QFSSGLTIIIAFAALFVVVIVGVSVLMKRFVFAPIHLAREHCSQIAAGKLTEAVPQKTGS
NNEIDLLMGSMEEMRLALLDTVSQVRAACHTVNHASQEIASGNIDLASRTEQQAAALTET
AASMEQLSATVANNTENVNQAGKLVQDAVNNARTGEAVTREVIDTMNTIAANSQRIEDIT
SVINSIAFQTNILALNAAVEAARAGTQGRGFAVVATEVRTLAQKSAVAAKDIENLIAQSV
SSVKNGSQLVNRSGEVIHAIITSVNKVNALMEQIQVASEEQSRGIGQVGQAVTEMDGVTQ
QNAALVQESAAAAASLEEQARHLTQSIASFRLPEPA
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaaaaaagtcgtctcttaccatcctgcttgccctgctgtttttctttgtcgcc
agtgccgctaccaacgtctggctggccattaaaagcaacaactccctggataacgtgaat
aaagagattcaggtggtgttatccattatcgatcccattaaccatagccgtaccctgcgc
gtgcgggttatggagtatatgaaacaggtggaaagtggcgacaccaccggtctcgatgag
aagctggcctccgttaagctggctctgaccaaagccgatggcgccttcgccgcctttaat
gacgccccccgcctggcggacgaagcgccgctggtgaaaaactataatgacggctggctg
gcctaccgcgatcgtggcctggtgccgctgattgaggcggcctctgcccatgacaaggca
aagtttgatgcgctgatcccgcagatttctggcctcgaccgtcagtacgaaattgttctc
gatgaggtgctgtcggtgcaccagaaatacgcgaaacagttaaatgacgatgcgcggtcg
cagttttcttccggcttaaccatcattatcgcttttgccgccctttttgtggtggtcatt
gttggggtaagcgtcctgatgaagcggtttgtcttcgcgccgattcatctcgcccgtgag
cactgcagccagatcgccgccggtaaattaacggaagcggtcccgcagaaaaccggatcg
aacaatgagatcgacctgctgatgggctcgatggaggagatgcgtctggccctgctggat
acggtctctcaggtacgtgctgcctgccataccgttaaccacgcctcgcaggagattgcc
tccggcaatatcgacctggcttcccgcaccgagcagcaggccgcagccctgacggaaacg
gccgccagcatggagcagctgagcgcgacggttgccaataataccgagaacgtcaaccag
gcaggtaagctggtgcaggatgcggtgaacaacgcccgtaccggggaggccgtgacccgc
gaggtgatcgacaccatgaacaccatcgccgccaactctcagcgcatcgaagatatcacc
agcgtcattaacagcatcgctttccagaccaatattctggcgctgaatgccgccgttgaa
gcggctcgcgccgggacgcaggggcgtggatttgcggtggtggcgactgaagtgcgcacc
ctggcgcagaaaagcgccgtggcggcgaaggatattgagaacctcatcgcccagtcggtt
tccagcgtgaaaaacggttcgcagctggtgaatcgctcgggtgaagtcattcatgccatc
atcacctcggtgaacaaagtcaacgcgctgatggagcagattcaggtggcgtccgaagag
cagagccgcggcattggtcaggtaggacaggccgtgaccgaaatggatggcgtgacccag
cagaacgccgcgctggtgcaggagtctgcggcggcagcggcttcgctggaagagcaagcc
agacacctcacccaaagtattgccagcttccgcctcccggaaccagcataa
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