Leclercia sp. W17: DVA44_16855
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Entry
DVA44_16855 CDS
T05987
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lee
Leclercia sp. W17
Pathway
lee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DVA44_16855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lee03019
]
DVA44_16855
Enzymes [BR:
lee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DVA44_16855
Messenger RNA biogenesis [BR:
lee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DVA44_16855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HI1480
AAA_19
DUF6482
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AXF65655
LinkDB
All DBs
Position
complement(3403795..3405156)
Genome browser
AA seq
453 aa
AA seq
DB search
MSFDTLGLNPEILRAVAEQGYREPTPIQQQAIPAVLAGRDLMASAQTGTGKTAGFTLPLL
QRLISSEPHAKGRRPVRALILTPTRELAAQVGENVREYSRYLNIRSLVVFGGVSINPQMM
KLRGGVDVLIATPGRLLDLEHQNAVKLDSVEILVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIALEGYEVDPSIKAEPIQNGRQGGRGQGGGRGQGGGGRGQQQPRRSEGGA
PKAANKPPRRDGDAKPAGEGQRRRRPRKPASAQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgatacccttggcctgaacccggaaattctgcgcgctgtagcggagcagggt
taccgcgaaccgacccctattcagcagcaggccattcccgctgtactggcaggccgcgat
ctgatggccagcgcccagaccgggaccggtaaaaccgctggctttaccctgccgctgctg
caacgcctgatctcaagcgaaccgcacgccaaaggccgtcgcccggtgcgcgccctgatc
ctgaccccaacccgtgaactggccgcccaagtgggtgagaacgtgcgtgagtacagccgc
tatctcaacatccgctcgctggtggtgtttggcggggtgagcatcaacccgcagatgatg
aaactgcgcggcggcgtggacgtgctgatcgccaccccgggccgtctgctcgacctggaa
caccagaacgccgttaagctcgacagcgtggagatcctggtgctcgacgaagccgaccgc
atgctggacatgggctttatccacgatattcgtcgcgtgctggcaaaattgccggcccgc
cgtcagaacctgctcttctccgccaccttctccgacgagatcaaaggcctggcggaaaaa
ctgctgcacaatccgctggaagtggaagtggcgcgtcgtaacaccgcctccgaacaggtg
acccagcacgttcactttgttgataaaaagcgcaagcgcgaactgctctcccagatgatt
ggcgaagggaactggcagcaggtgctggtctttacccgtaccaaacatggggcgaaccac
cttgcggaacagctgaacaaagacggcatccgcagcgcggcgatccacggcaacaagagc
cagggggctcgtacccgcgcgctggccgattttaaatccggtgatatccgcgtactggtg
gcaaccgacatcgccgcccgcggtctggatattgaagagctgccgcacgtggtgaactac
gagctgccgaacgttccggaagattatgtccaccgtatcggccgtaccggtcgcgcggcg
gcaacgggcgaagcgctgtcgctggtctgtgttgatgagcacaagctgctgcgcgacatc
gaacggttgctgaaaaaagagatcccgcgtatcgccctcgaaggctatgaggtagatccg
tccatcaaagctgagccgatccagaacgggcgtcagggcggacgtggtcagggtggtgga
cgcgggcagggcggcggtggacgtggtcagcagcagccgcgccgtagcgaaggcggcgcg
ccgaaagcggcaaacaaaccgccgcgtcgcgatggcgacgcgaaaccggcaggtgaaggc
cagcgccgacgccgtccgcgcaaacctgccagtgcgcagtaa
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