Leclercia sp. W17: DVA44_16945
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Entry
DVA44_16945 CDS
T05987
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lee
Leclercia sp. W17
Pathway
lee03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DVA44_16945 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lee03400
]
DVA44_16945 (uvrB)
DNA repair and recombination proteins [BR:
lee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DVA44_16945 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DVA44_16945 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
SBDS_domain_II
AAA_22
DUF87
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AXF65671
LinkDB
All DBs
Position
complement(3419490..3421505)
Genome browser
AA seq
671 aa
AA seq
DB search
MSKPFKLNSAFRPSGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTVANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDFALRVELFDEEVERLSLFDPLTGHVESTIQR
FTVYPKTHYVTPRERIVQAMEDIKVELADRRRVLLENNKLLEEQRISQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEAPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGDEVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRARSAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLG
QNIAKTKTKGRGKSRSPVEADTVALTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQL
HQLRDLFIAAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactgaattccgcttttcgtccctccggcgatcagcctgaagcg
attcgccgtctgaaagaggggctggaggatgggcttgcgcaccagacgctgctgggggta
accgggtcgggtaaaaccttcaccgtcgctaatgtgatcgccgatctccagcgccccaca
atggtgctcgccccgaacaaaaccctagcggcgcagctctacggcgagatgaaagagttc
ttccccgagaatgcggtggagtacttcgtgtcgtactacgactactatcagccggaagcc
tacgttcccagctcggacacctttatcgagaaggatgcctcggtgaacgagcatattgag
cagatgcgtctgtccgcgaccaaggcgctgcttgagcgccgtgacgtggtggtggtggcc
tcggtatcggccatctacggcctcggcgacccggatctctacctgaagatgatgctgcac
ctgaccgtggggatgattatcgatcagcgcgccattttgcgtcgcctggccgagctgcag
tacacccgtaacgatcaggcgttccagcgcggtacgtttcgcgtgcgcggcgaagtgatc
gacatcttcccggcggagtcggacgacttcgcgctgcgcgtcgagcttttcgatgaagag
gtggagcggctgtcgctgttcgacccgctgaccggccatgtggaatcgaccattcagcgc
ttcacggtctacccaaaaacccactatgtcaccccgcgcgagcgcatcgtgcaggcgatg
gaggacatcaaggttgaactggcggatcgtcgcagggtgctgttagaaaataacaagctg
ctggaagagcagcgtatcagccagcgtacccagttcgatctcgagatgatgaacgagctg
ggctactgctccggtatcgaaaactactcgcgctatctctctggccgtgggccgggcgaa
gcgccgccaaccctgtttgactacctgccggcggatggcctgctggtggtggatgaatcc
cacgtcaccattccgcagattggcgggatgtatcgtggcgaccgggcgcgtaaagagacc
ctggtggagtacggcttccgcctgccgtcggcgctggataaccgtccaatgaagtttgaa
gagttcgaggcgctggcgccgcaaactatctacgtctccgcaacgccaggcaactacgag
ctggagaaatcgggcgacgaggtggtggatcaggtggtgcgtccgaccggcctgctggat
ccgattatcgaagtgcgtccggtggccacccaggtggatgacttgctctcggaaatccgc
gcccggtcggccattaacgagcgtgtgctggtgacgaccctgaccaagcggatggcggaa
gacctgaccgaatacctcgaagagcacggtgagaaggtgcgctatctgcactcggatatc
gacaccgtggagcgcatggaaattatccgcgatctgcgtcttggcgagttcgacgtgctg
gtggggatcaacctgctgcgtgaggggctggatatgccagaagtgtcgctggtggcgatt
ctggacgccgacaaagagggcttcctgcgttccgagcgctcgctgatccagaccattggt
cgtgcggcgcgaaacgttaacggtaaagcgattctctacggggataagatcaccccgtcg
atggcgaaagcgatcggcgaaaccgaacgccgtcgcgagaagcagcagcgctataacgaa
gagcacgggattgttccgcaggggctcaacaagaaggtggtggatatcctgcagcttggc
cagaatatcgcgaaaaccaaaaccaagggacgcggcaagtcgcgctcaccggttgaggcc
gataccgtggccctgacgccgaaagcgctgcagcagaaaatccacgagctggaagggcag
atgatgcagcacgcacagaacctggagttcgaagaggcggcgcagatccgcgaccagctg
catcagctacgggatttattcatcgccgcgtcgtag
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