Leclercia sp. W17: DVA44_19715
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Entry
DVA44_19715 CDS
T05987
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lee
Leclercia sp. W17
Pathway
lee03030
DNA replication
lee03430
Mismatch repair
lee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DVA44_19715
03430 Mismatch repair
DVA44_19715
03440 Homologous recombination
DVA44_19715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lee03032
]
DVA44_19715
03400 DNA repair and recombination proteins [BR:
lee03400
]
DVA44_19715
Enzymes [BR:
lee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DVA44_19715
DNA replication proteins [BR:
lee03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DVA44_19715
DNA repair and recombination proteins [BR:
lee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DVA44_19715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AXF66159
LinkDB
All DBs
Position
complement(3950714..3954196)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGTAHGA
GMKPVIGADFHVQSELLADEMTQITVLALNNTGYQNLTLLISRAYQRGYGPQGPWIDRAW
LAELNEGLLLISGGRMGDVGRCLLRGNTALVEQCVDFYKEYFPDRFYLELIRTGRPDEES
YLHAAVALAEEQGLPVVATNDVRFINADDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVMKSKEGL
EERLEFLFPDPAVRAEKRPEYDERLDVELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDESGLHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRRAKQGLEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
LSYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFEDGAKKNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGQYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNQGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHSKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQTVLDGERETLGLY
LTGHPINQYIKEIERYVGGYRLKDMHPTERGKITTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGASWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcacagcgactattccatgattgatggg
ctggcgaagaccgggccgctggtgaaaaaggcggcctcgcttggcatgcctgcgctggcg
atcaccgacttcaccaacctgtgcggtctggtgaagttctacggaacggcgcacggtgcc
gggatgaagccggtaattggtgctgattttcacgtacagagcgagctcctcgccgatgaa
atgacgcaaattaccgtcctggcgctgaacaataccggctatcagaacctgacgctgttg
atctcccgtgcctatcagcgcggctacggcccgcagggtccgtggatcgatcgcgcatgg
ctggcggagctgaatgaggggctgctgctgatctccggcgggcgtatgggcgacgtaggc
cgttgcctgctgcgcggcaacaccgccctggtggagcagtgcgtcgatttttataaagag
tatttcccggatcgcttctacctggagttgatccgcaccggtcgtcctgatgaagagagc
tatctgcacgccgcggtcgccctggcggaagagcagggcctgccggtggttgccaccaac
gatgtgcgcttcatcaacgccgacgattttgacgcccatgaaattcgcgttgccattcac
gatggttttactctcgacgatcccaaacgcccgcgcaactattcgccgcagcagtacatg
cgcagcgaagaggagatgtgcgagctgttttccgatatcccggaagcgctggagaatagc
gtagagatcgccaagcgctgtaacgtcaccgtccgtttgggtgaatatttcctgccgcag
ttcccgaccggcgacatgaccaccgaagacttcctggtcatgaaatcgaaagaaggtctg
gaagaacgacttgagtttctcttcccggatccggccgttcgcgccgagaaacgtccggag
tatgacgagcgtctggacgttgagctccaggtgattaaccagatggggttccccggctac
ttcctgatcgttatggagtttatccagtggtcgaaagacaacggcgtaccggtagggccg
ggccgtggttcgggtgccggatcgctggtggcctatgcgctgaaaattaccgatctcgat
ccgctggaatttgacctgctgttcgaacgcttccttaacccggaacgtgtctcgatgccc
gactttgacgtcgatttctgcatggagaaacgcgaccaggtcattgaacacgtggcagac
atgtacggtcgtgacgcggtatcgcagatcattaccttcggtaccatggcggcaaaagcc
gttatccgcgacgtgggccgcgtgctggggcatccgtacggctttgttgaccgtatctcg
aagctggtgccgcctgacccgggcatgaccctggcgaaagcgttcgaagcggagccgcag
ctgccggaaatctatgaggcggatgaagaggttaaagcgctgatcgacatggcgcgtaag
ctggaaggggtcacccgaaacgccggtaaacacgccggtggggtggtcattgccccgacc
aaaattaccgactttgcgccgctctactgcgatgaatcgggcctgcatccggtcacccag
tttgacaagaatgacgtggaatatgccgggctggtgaagtttgacttcctcggcttgcgt
acgcttaccatcatcgactgggcgttgaagatgatcaacccgcgccgggccaagcagggc
ctggagccgattgatatcgccgcgatcccgctcgatgacaagaaaagtttcgacatgctg
caacgctcggagaccacagcggtcttccagcttgaatcccgcggcatgaaggatctgatc
aaacgtctacagcctgactgcttcgaagatatgatcgcgctggtggcgctgttccgtccg
gggccgctgcagtccgggatggtagataactttatcgaccgtaagcatggccgcgaggag
ctctcctatccggatgtacagtggcagcatgaaagcctgaagccggtgctggagccaacc
tacggcatcatcctgtatcaggaacaggtcatgcagatcgcccaggtgctctccggctac
accctcggcggcgcggatatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgctctatatttgaagatggggcgaagaaaaacggcatcgacggcgaactg
gcgatgaagatcttcgatctggtagagaaatttgccggatacggatttaacaaatcgcac
tctgcggcctacgcgctggtctcctatcagacgctgtggctgaaggcgcactacccggcc
gagtttatggccgcggtaatgaccgccgatatggacaacaccgagaaggtagtcgggctg
gtggatgagtgctggcgcatggggctgaaaatcctgccgcctgacatcaactccggtcag
taccacttccacgtcaatgacgacggggagattgtctacggcatcggcgcgatcaaagga
gtgggtgaaggcccgatcgaagcgatcatcgaagctcgtaaccagggcggctacttccgc
gagctgtttgacctgtgcgcgcgcaccgatattaaaaagctcaaccgccgggtgctggaa
aagctgattatgtccggggcgttcgatcgtctcgggccgcatcgcgcggcgctgatgaac
tcgctgggtgacgccctgaaggccgccgaccagcactcaaaagccgaggccattgggcag
gcggatatgttcggcgtactggcagaagagccggagcagattgaacaatcctatgccagc
tgtcagccgtggccggaacagaccgtgctggatggtgagcgcgagacgttaggcctgtac
ctgaccgggcatccaatcaatcagtatattaaagaaattgagcgctatgtcggaggctac
cggctgaaagacatgcatccgacagaacgtggtaagattactacggctgcggggctcgtc
attgctgcgagggttatggtcaccaaacgcggcaatcgtatcggcatctgtacgctggat
gaccgttccgggcggctggaggtgatgttattcaccgacgcgctggataaataccagcag
ctgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
gggggacttaaaatgaccgcccgcgaagtgatggacattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggaccattccagtacatctctactatcag
agggcggatgcgcgtgcacggttgcgctttggtgcgtcgtggcgtgtctctccgagcgat
cgtttactcaacgatctacgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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