Leclercia sp. W17: DVA44_21765
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Entry
DVA44_21765 CDS
T05987
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
lee
Leclercia sp. W17
Pathway
lee03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lee00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DVA44_21765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lee03019
]
DVA44_21765
03009 Ribosome biogenesis [BR:
lee03009
]
DVA44_21765
Messenger RNA biogenesis [BR:
lee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DVA44_21765
Ribosome biogenesis [BR:
lee03009
]
Eukaryotic type
Pre-60S particles
RNases
DVA44_21765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RE_XamI
Motif
Other DBs
NCBI-ProteinID:
AXF66534
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All DBs
Position
complement(4388166..4388711)
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AA seq
181 aa
AA seq
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MSADENNLIWIDLEMTGLDPERDRIIEIATLVTDAKLNILAEGPTIAVHQSDEQLALMDD
WNVRTHTGSGLVDRVKASTQGDREAELATIEFLKQWVPQGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILDGFKKQGTHQAMDDIRESVAELAYYREHFIN
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagatgaaaacaatctgatttggatcgatctggagatgaccgggcttgatccc
gagcgcgatcgcattattgagatcgccacgctggtcactgacgcaaagctgaatatcctg
gcggaagggccgaccattgccgtgcaccagtccgacgaacagctggcgctgatggatgac
tggaacgtgcgcacccacaccggcagcgggctggtggatcgcgtgaaagccagcacccag
ggcgaccgcgaagccgagctggcgacaatcgaatttctgaagcagtgggtaccgcaggga
aaatcaccgatttgtggcaacagcatcggccaggatcgccgcttcctgtttaagtacatg
ccggaactcgaagcgtatttccactaccgttatctggatgtcagcaccctgaaagagctg
gcgcgtcgctggaagccggaaattctcgacggttttaagaagcagggcacccaccaggcc
atggatgacatccgtgagtcagtggcggagctggcctactaccgcgaacattttattaat
ttataa
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