Leclercia sp. W17: DVA44_22555
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Entry
DVA44_22555 CDS
T05987
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
lee
Leclercia sp. W17
Pathway
lee00071
Fatty acid degradation
lee00280
Valine, leucine and isoleucine degradation
lee00310
Lysine degradation
lee00362
Benzoate degradation
lee00380
Tryptophan metabolism
lee00410
beta-Alanine metabolism
lee00640
Propanoate metabolism
lee00650
Butanoate metabolism
lee00907
Pinene, camphor and geraniol degradation
lee00930
Caprolactam degradation
lee01100
Metabolic pathways
lee01110
Biosynthesis of secondary metabolites
lee01120
Microbial metabolism in diverse environments
lee01200
Carbon metabolism
lee01212
Fatty acid metabolism
Module
lee_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
lee00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
DVA44_22555 (fadB)
00650 Butanoate metabolism
DVA44_22555 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
DVA44_22555 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
DVA44_22555 (fadB)
00310 Lysine degradation
DVA44_22555 (fadB)
00380 Tryptophan metabolism
DVA44_22555 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
DVA44_22555 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
DVA44_22555 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DVA44_22555 (fadB)
00930 Caprolactam degradation
DVA44_22555 (fadB)
Enzymes [BR:
lee01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DVA44_22555 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
DVA44_22555 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
DVA44_22555 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
DVA44_22555 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
GpA_nuclease
Motif
Other DBs
NCBI-ProteinID:
AXF66674
LinkDB
All DBs
Position
4558706..4560895
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDTLYVDWLEGGIAELVFDAPGSVNKLDTATVASLGQALDVLEKQTDLKGLLLRSE
KAAFIVGADITEFLSLFLVPQEQLSQWLHFANSVFNRLEDLPVPTLSAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVSADQALK
LGLVDGVVKPEKLHEGALAILRQAINGDLDWKAKRQPKLEPLHLSKIEATMSFTIAKGMV
MQTAGKHYPAPITAVKTIEAAARLGRDEALKLENQSFVPLAHTNEARALVGIFLNDQFVK
GKAKQLTKNVETPKQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLL
NKQLERGKIDGLKLSGVISTIHPTLEYSGFDRVDVVVEAVVENPKVKKAVLAETEEKVRP
ETVLASNTSTIPISELASVLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDETIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFESNRYGQKNGLGFWRYKEDSKGKP
KKEEDAAVDSLLVEVSHAKRDFSDEEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSARYLDMTQQYEHLGALYHAPEGLRTKARNNEAYYPPVEPA
RPVGALKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctacaaaggcgacaccctgtacgtagactggctggaaggtggcattgccgaactg
gtgttcgacgcccccggctcagtgaacaagcttgataccgcaaccgtggccagccttggc
caggcgctggacgttcttgaaaaacaaaccgatttaaaaggtctgctgctgcgttccgaa
aaagcggcatttatcgtcggcgcagacatcaccgaattcctctcgctgttcctggtaccc
caggagcagttgagccagtggctccatttcgccaacagcgtctttaaccgtctggaagat
ctgccggtcccgaccctttctgcggtcaatggctatgcgctgggcggcggctgtgaatgc
gtgctggcgaccgattaccgtctggcaacgccggatctgcgcattggtctgcctgaaacg
aagctgggcatcatgccgggctttggcggctcggtacgcctgccgcgcctgctgggtgcc
gacagcgccctggaaattatcgccgcaggtaaagatgtcagtgccgatcaagcgttaaag
ctcggtctggtggatggcgtcgttaagccggaaaaactgcatgaaggggctctggcgata
ctgcgccaggcgattaacggcgatctcgactggaaagcgaaacgccagccgaaactggag
ccgctgcacttaagtaaaattgaagccaccatgagtttcaccatcgccaaaggcatggtg
atgcagacggcgggtaaacactatccggcgccgatcaccgcggtgaaaaccatcgaagcc
gccgcacgtctgggccgtgacgaagcactgaaattagaaaaccaaagtttcgtcccactg
gctcacaccaacgaagcccgtgcgctggtcggtattttccttaacgatcagttcgtgaag
ggcaaagcgaagcagctgactaaaaacgttgagacgccaaaacaggctgcggtgctgggt
gcgggcattatgggcggcggcatcgcctaccagtcggcctggaaaggcgtgccggtggtg
atgaaagatatcaacgataaatccctgacgctgggcatgaccgaagcggccaagctgctg
aacaaacagctggagcgcggcaagatcgacggtctgaagctctccggcgtgatctccacg
attcatccaacgctggaatacagcggtttcgaccgcgtggatgtggtcgtcgaagcggta
gttgaaaacccgaaagtgaaaaaagcggtgctggcggaaacagaagagaaggttcgcccg
gagactgtgctggcctccaacacctctaccattccaatcagcgaactggccagcgtgctg
aagcgcccggaaaacttctgcggcatgcacttctttaacccggtgcaccgtatgccgctg
gttgaagtgattcgcggagaaaagacctccgatgaaacgatcgccaaagtcgtggcctgg
gccagcaagatgggcaaaaccccaattgtcgttaatgactgcccgggcttcttcgtcaac
cgcgtgctgttcccctactttgccggtttcagccagctgctgcgcgacggggcggatttc
cgcaagatcgacaaagtgatggaaaaacagtttggctggccgatgggcccggcctatctg
ctggatgttgtgggtattgatacggcccatcacgcccaggcggtgatggcggcaggcttc
ccgcagcgcatgcagaaagattaccgcgatgccatcgacgccctgttcgaatcgaatcgc
tacggtcagaaaaacggcctcggcttctggcgttataaagaagacagcaaaggtaagccg
aagaaagaggaagacgcagccgtggacagcctgctggtagaggtcagccacgcgaagcgc
gatttcagcgacgaagagattattgcccgcatgatgatcccgatggtcaacgaagtggtg
cgctgtctcgaagagggcattatcgccagcccggcggaagcggatatggcgctggtgtac
ggcctgggcttccctccgttccacggcggcgcgttccgctggctggatacgctcggcagc
gcccgctatctggatatgacgcaacagtacgagcatctcggcgcgttgtatcatgcaccg
gaaggtctgcgtaccaaagcgcgtaataacgaagcgtactatcccccggttgagcctgcc
cgtccggttggcgcactgaaaacggcttaa
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