Leclercia sp. W17: DVA44_23960
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Entry
DVA44_23960 CDS
T05987
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
lee
Leclercia sp. W17
Pathway
lee03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DVA44_23960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lee03400
]
DVA44_23960
DNA repair and recombination proteins [BR:
lee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DVA44_23960
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DVA44_23960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_21
DnaJ_CXXCXGXG
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
AAA_25
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AXF67118
LinkDB
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Position
pW17-1:25450..28101
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AA seq
883 aa
AA seq
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MAKKLFGYHPILTDDNNSVVIRGARENNLKEVDVSIPRNALVVFSGVSGSGKSSLAFGTI
YAEAQRRYFESVAPYARRLIDQVGVPDVDAIDGLPPAVALQQQRGASNARSSVGSVTTLS
SLVRMMYSRAGAYPAGQPMLYAEDFSPNTPQGACPSCHGLGHIYEVTETLMVPDPSLSIR
EKAIASWPPAWHGQNLRDILVTLGYDIDTPWKNLPAEDRQWILFTEDTPTVPVFPGLSPE
DTREAVRKKMTPGYMGTFTGARRYVLHTFASTQSALMRKRVSRFMEGKLCPVCHGKRLKS
ESLSVTFAGVDIGEFMQMPLDQLAELLLPISRGDFSAHHAGADADRDITRRDLTERAASG
KAVHSDNADVCRTSALSEEKRLAAQRLTGGVMARLYQLQKLGLGYLTLDRATPTLSAGEL
QRLRLATQLSSMLFGVVYVLDEPSAGLHPSDSKALYDALENLRDAGNSVFVVEHDLNLMR
RAQWLVDVGPSAGEQGGHVLYSGIPEDLKAVTQSRTARYLFDEVRPPQSFARIPSGWLKL
QGIHRHNLKWIDVDIPLGVLTAVTGVSGSGKSSLIAQALPELVLSSLGGEPEDVLSEASD
AEGPSVTEKTYGTLTGDTGLVKRLVQVDQKPIGRTPRSNLATYTGLFDPVRKLFAGTTDA
KLHHYDAGQFSFNVAKGRCATCEGEGFVSVELLFMPSVYAPCPTCHGARYNRDTLRICWQ
DKNIAEVLHMTVDEASQFFATEEPVARPLRLLSEIGLGYLRLGQPATELSGGEAQRIKLA
TELQRSQRGHTLYILDEPTTGLHASDADRLLVQLQRLVDAENTVIMIEHDMRAVTQADQV
IDIGPGAGHEGGRLVAAGTPEQVSQVKESRTAQYIARELSRNG
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaacttttcggttatcatcccatcctgactgacgacaacaattcagttgtg
attcgcggtgctcgcgagaacaaccttaaagaggtggatgtttccattccgcgcaacgca
ttggttgttttttcgggtgtgtcaggctcgggtaagtcttcactggcctttggcaccatt
tatgctgaggcgcaacggcgctactttgaatcggttgccccctacgctcgtcgcctcatt
gatcaggtcggggttccggatgtggatgccattgacggactgccgccagccgttgcgctt
cagcaacaacgcggtgccagtaacgcgcgctcctctgtcggcagcgtgaccaccttatcc
agtctggtgcgaatgatgtactcacgggcgggcgcttatcctgccggacaaccgatgctg
tatgccgaggatttttctcccaacacgccgcagggggcatgcccttcttgccatggtctg
ggccatatctatgaggtaactgaaacactgatggtgcccgatccctcacttagtatccgt
gaaaaggctattgcttcctggcccccggcctggcacggacagaatctgcgggatattctg
gtgacgctggggtatgacatcgacactccctggaaaaatctgccagcggaagaccgtcag
tggatcctttttaccgaagacacccccactgtaccggttttcccgggactgagtccggaa
gatacgcgcgaagccgtcaggaaaaaaatgacgccgggttatatggggaccttcaccggg
gcacgtcgttatgtgctacataccttcgccagcacgcaaagcgcgttgatgagaaaacga
gtctcccgttttatggaaggcaagctgtgtccggtctgtcacgggaaaagactgaagtca
gaatcattgtccgtcacctttgccggtgtggacattggtgaatttatgcagatgccctta
gaccagctggcggaattgctccttccaatctcccggggggatttcagtgcccaccacgcc
ggcgcagatgccgacagggatatcacccgtcgggatctgacagagcgtgctgcatccgga
aaagcggtccattccgataacgccgatgtctgccggacatcggcgttatcggaagagaaa
cgactggcggcacaacggctgaccggtggtgtcatggcccggttgtatcagttgcagaag
ctggggctgggttatcttacgctggacagagcaaccccaactctatctgcaggagagctt
cagcgactgcgtcttgccacgcaactcagttcgatgctgtttggtgtggtctatgttctt
gatgaaccgtctgcgggtctgcacccctcagacagtaaagcgctttacgatgcgcttgag
aaccttcgtgatgccggcaactcggtgtttgtcgttgaacatgatcttaacctgatgcga
cgggcgcaatggcttgttgatgtgggaccgtcggctggtgaacagggaggacatgttctc
tacagtggtattcctgaagatctgaaagccgtcacccaatctcgtaccgcgcgttattta
tttgatgaagtccggccaccacaatcttttgcccgtatcccatccgggtggctgaaactg
caggggatccatcgccacaatcttaagtggatcgatgttgatattcctctgggtgtgctg
acagccgtgacgggagtctctggctccggtaaatccagtctgattgcccaggccttaccg
gaactggtgctttcttcacttggcggtgagccagaagacgtgctttccgaagccagcgac
gctgaggggccatccgtaacggagaaaacgtacggtaccctgaccggtgataccggactg
gtaaagcgtctggttcaggttgaccagaaaccgataggcaggaccccccgttcaaacctg
gcgacatataccgggttgtttgatcctgttcgtaagctctttgccggaacgactgacgcc
aaactccatcattacgatgcgggtcaattctctttcaatgtggcaaaaggccgctgtgca
acctgtgaaggtgaaggattcgtcagcgtggagctgttgtttatgccgagcgtgtatgca
ccgtgcccgacctgccatggcgcgcggtataaccgggatactctcaggatctgctggcag
gacaaaaatatcgcggaggtcctgcatatgacggtggatgaagccagtcagttctttgcg
actgaagaaccagtggctcgtcccctccgtctgctgagtgaaattggtctgggctacctg
cgtctgggacaaccagcaaccgagttatccggaggggaggcgcaaaggatcaagctggca
accgaactacaacgtagccaacgtggccacacgttgtatatcctagatgaaccgacaacc
ggcctgcatgcttcagacgccgaccgcctccttgtgcagctgcagcggcttgttgatgca
gaaaatacggtgataatgattgaacacgatatgcgggcggttactcaggcagaccaggtt
atcgacatcggtcctggagcgggacatgagggaggacgcctggttgccgcaggaactccc
gaacaggtatcgcaggtcaaagaaagccgtaccgcacagtatattgccagggaactctca
cggaacggttaa
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