Lelliottia jeotgali: LJPFL01_0082
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Entry
LJPFL01_0082 CDS
T05035
Name
(GenBank) DNA-directed RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
lef
Lelliottia jeotgali
Pathway
lef03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lef00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LJPFL01_0082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lef03021
]
LJPFL01_0082
03400 DNA repair and recombination proteins [BR:
lef03400
]
LJPFL01_0082
Enzymes [BR:
lef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LJPFL01_0082
Transcription machinery [BR:
lef03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LJPFL01_0082
DNA repair and recombination proteins [BR:
lef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LJPFL01_0082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ASV53445
LinkDB
All DBs
Position
complement(84272..84547)
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQLQSGGKDPLVPEENDKTTVIALREIEEGLIN
NQILDVRDRQEQQEQEAAELQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaggacgctgtagagaaaattggtaaccgttttgacctggta
ctggtcgccgcgcgtcgcgctcgtcagttgcagtccggtggtaaagatccactggtacca
gaagaaaacgataaaaccaccgtgatcgcgctgcgcgaaatcgaagaaggtctgatcaac
aaccagatcctcgacgtacgtgatcgccaggagcagcaagagcaggaagccgcagaactg
caggctgtaaccgccattgctgaaggtcgtcgttaa
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