Lelliottia jeotgali: LJPFL01_0404
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Entry
LJPFL01_0404 CDS
T05035
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
lef
Lelliottia jeotgali
Pathway
lef02024
Quorum sensing
lef03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lef00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LJPFL01_0404
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LJPFL01_0404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lef03019
]
LJPFL01_0404
03036 Chromosome and associated proteins [BR:
lef03036
]
LJPFL01_0404
Messenger RNA biogenesis [BR:
lef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LJPFL01_0404
Chromosome and associated proteins [BR:
lef03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
LJPFL01_0404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ASV53767
LinkDB
All DBs
Position
430584..430895
Genome browser
AA seq
103 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNAGGGTGSNFHHGSNAQGSSAPAQDSEETE
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttacaagatccgttcttgaacgcattgcgtcgtgaacgtgtt
ccagtttctatttatttggtgaatggtattaagctgcaaggccagattgagtctttcgat
cagttcgtgattctgttgaaaaacacggtcagccagatggtgtataagcacgctatttct
actgttgttccgtcccgtccagtatctcatcacagcaacaacgctggcggtggcaccggt
agtaatttccatcatggcagcaacgcacagggctcttctgcacctgcgcaggacagcgaa
gaaaccgagtaa
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