Lelliottia jeotgali: LJPFL01_0696
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Entry
LJPFL01_0696 CDS
T05035
Name
(GenBank) RNA polymerase associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
lef
Lelliottia jeotgali
Brite
KEGG Orthology (KO) [BR:
lef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lef03021
]
LJPFL01_0696
Transcription machinery [BR:
lef03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LJPFL01_0696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Tudor_1_RapA
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ASV54059
LinkDB
All DBs
Position
complement(737200..740022)
Genome browser
AA seq
940 aa
AA seq
DB search
MVTILFPATGENRLYARNDSPVTRVMFNPGDTVTSHEGWQLKIEDVKEENGILAYIGTRV
DTEETNVILREVLLDSRLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLR
GQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVP
ETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDADNPFETEQLVICSLDFVRRSKQRLEH
LCDAEWDIMVVDEAHHLVWSEDAPSREYMAIEQLAERVPGILLLTATPEQLGLESHFARL
RLLDPNRFHDFSVFVEEQQNYRPVADAVALLLAGKHLSNDELNTLSELIGEQDIEPLLHA
ANSDRDDAETARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAI
KVSGIMGARKSAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTAHRSQKVLV
ICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFGEEDSGAQVLLCSEIGSE
GRNFQFASHLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPFLEKTAQSVLVRWFHEG
LDAFEHTCPTGRTIYDQVHSDLIGYLAAPEETEGFDDLIKSCREKHDALKLQLEQGRDRL
LEIHSNGGEKAQALAESIEEQDDDTSLISFAMNLFDIVGINQDDRGENMIVLTPSDHMLV
PDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKA
LPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRLMLDKNGTNLAAQVEFESFNRQLSAV
NRHTGSKLVNAVQQDVHAILQQGEAQIEKAARALIDAARSEADDKLSAELSRLEALKAVN
PNIRDDELAAIESNREQVMESLDQASWRLDALRLIVVTHQ
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggtcaccatcctgttcccggccaccggtgaaaaccgtctgtatgcacgcaatgattcc
cctgttacccgcgtcatgtttaatccgggcgacaccgttaccagccatgaaggctggcag
ctgaagattgaagacgtaaaagaagagaatgggatcctcgcctacatcggtacgcgagtg
gatactgaagaaacgaatgtcatcctgcgcgaagtcttactcgacagccgcctggtgttt
agcaagccgcaggaccgtctgttcgccggtcagattgaccgcatggaccgttttgccctg
cgctatcgcgcgcgtaagttccagagcgagcagtaccgtatgccgtggagcggcctgcgc
ggtcagcgcaccagcctgatcccgcaccagttgaacatcgcccacgacgtcggtcgtcgt
catgcaccacgcgtgctgctggctgatgaggtgggcttaggtaaaaccatcgaagcgggc
atgatcctgcatcaacagctgctttctggcgctgctgagcgcgtgctgattgtggtgcct
gaaaccctgcaacaccagtggctggtcgagatgctgcgccgcttcaacctgcgcttctcg
ttgtttgacgatgaacgctacgccgaagctcagcacgatgcggataacccgttcgaaacg
gaacagctggtgatttgctccctcgatttcgtgcgccgcagcaagcagcgccttgagcat
ctgtgcgacgccgaatgggatatcatggttgtcgacgaagcgcaccatctggtgtggagc
gaagacgcgcctagccgtgaatatatggctatcgaacagctggcggaacgcgtgccgggt
attctgctgctgaccgccacgccggaacagctgggtctggaaagccactttgcccgtctg
cgtctgctcgatccaaaccgtttccacgatttctcggtgtttgtcgaagaacagcaaaac
taccgtccggttgccgatgctgtcgctcttctgctggccggaaaacacctctccaacgat
gaactcaacaccctgagcgagctgattggcgagcaggacattgagccgctgctgcacgcc
gccaacagcgaccgcgacgacgccgaaactgcgcgtcaggagctggtttcgatgctgatg
gaccgccacggcaccagccgcgtgttgttccgtaacacccgtaacggcgtgaaaggcttc
ccgaaacgcgagctgcacaccatcaagttgccgctgccaacccagtatcagacggcgatt
aaagtctccggcatcatgggggcgcgtaaaagtgcggaagagcgcgcacgcgacatgctc
tatccggaacaaatttaccaggaattcgaaggcgatactggaacctggtggaacttcgat
ccacgcgttgagtggctgatgggttatctcacggctcaccgctcgcagaaagtgctggtg
atttgcgccaaagcggccaccgcgctgcagctggagcaggtcctgcgcgagcgagaaggg
attcgcgctgccgtgttccacgaagggatgtcgatcatcgaacgtgaccgcgcggcggcc
tggttcggcgaagaggacagcggcgcgcaggttctgctctgttccgaaattggctccgaa
ggccgtaacttccagtttgccagccatctggtgatgttcgatctgccgtttaacccggat
ctgctggaacagcgtatcggtcgtctggaccgtatcggtcaggcgcatgatattcaaatc
cacgtcccgttcctggaaaaaaccgctcagtccgtactggtgcgttggttccacgaaggg
ctggacgcgtttgaacatacttgcccgaccggacgcactatttacgaccaggtacatagc
gatctgatcggttatctggcggctcccgaagagaccgagggcttcgacgacctgatcaaa
tcctgtcgcgagaagcacgatgcgctgaaattgcagctggagcaagggcgcgaccgtctg
ctggaaatccattccaacggcggcgaaaaagcgcaggccctggccgaaagcatcgaagag
caggacgacgacaccagcctgatcagctttgcaatgaacctgtttgatatcgtgggtatc
aaccaggacgatcgcggcgaaaacatgatcgtcctgaccccgtccgatcacatgctggtc
ccggacttccctggcctgccggaagatggttgcaccatcaccttcgaacgcgatgtggcc
ctttcccgcgaagatgcgcagttcatcacctgggaacacccgctgattcgcaacggtctg
gatttgattctgtccggcgataccggcagcagcaccatctccctgctgaaaaacaaagcg
ctgcctgtcgggacgctgctgcttgagctcatttacgtggttgaggcgcaggcgccaaaa
cagctgcagctcaaccgcttcctgcctgcaacgccggtgcgtttgatgctcgacaaaaac
ggtaccaacctcgccgcacaggtggagtttgagagctttaaccgtcagttgagcgcggtg
aaccgtcacacaggcagcaagctggtgaacgccgttcagcaggatgttcatgccatcctg
cagcagggcgaagcgcagattgagaaagccgcgcgcgcgctgattgacgccgctcgcagc
gaagcggacgataaactctcggccgagctgtcgcgtctggaagcgttaaaagcggtgaac
ccaaacatccgtgacgacgagctggctgcgatcgaaagcaaccgtgagcaggtcatggaa
agcctggatcaggcgagctggcgactggacgcgctgcgtctgatcgttgtgacgcatcag
taa
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