Lelliottia jeotgali: LJPFL01_0811
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Entry
LJPFL01_0811 CDS
T05035
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lef
Lelliottia jeotgali
Pathway
lef03030
DNA replication
lef03430
Mismatch repair
lef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LJPFL01_0811
03430 Mismatch repair
LJPFL01_0811
03440 Homologous recombination
LJPFL01_0811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lef03032
]
LJPFL01_0811
03400 DNA repair and recombination proteins [BR:
lef03400
]
LJPFL01_0811
Enzymes [BR:
lef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LJPFL01_0811
DNA replication proteins [BR:
lef03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LJPFL01_0811
DNA repair and recombination proteins [BR:
lef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LJPFL01_0811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ASV54174
LinkDB
All DBs
Position
875792..879274
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGTAHGS
GLKPIVGADFHVQSDLIGDELTQISVLAMNNTGYQNLTLLISRAYQRGYGAAGPWIDREW
LAELNEGLLLISGGRMGDVGKSLIRGNSVLVDQCVAFYEEHFPDRFYLELIRTGRPDEES
YLHAAVALAEERGLPVVATNDVRFLEPGDFDAHEIRVAIHDGFTLDDPKRPRNYSSQQYM
RNEDEMCELFADIPEALENSVEIARRCNVTVRLGEYFLPQFPTGDMTTEDFLVVKSKEGL
EDRLEFLFPDPVIRAEKRPPYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDESGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRRAKQGLEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHECLKPVLEPTYGIILYQEQVMQIAQELSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGAKSRGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINAGMYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYANCQPWPEHTVLEGERETLGLY
LTGHPINQYLKEIERYVGGYRLKDMHPTERGKMTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTEALEKYQHLLENDRILIVSGQVSFDDFSGGLKMMAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcatagcgactactccatgattgatggg
ctggcgaagaccgggccgctggtaaaaaaggcggcctcgcttggcatgcctgcgctggcg
atcaccgatttcactaacctttgcggtctggtgaagttctacggaacggcgcatggctca
ggtctgaagcctattgttggtgcagattttcacgtgcagagcgatctgatcggcgatgag
ctgacgcaaatttctgtgcttgccatgaataacacgggttaccaaaacctgacgctgctg
atctcccgcgcctaccagcgcggctacggtgcagcaggcccgtggatcgaccgcgagtgg
ctggcagagctgaatgaaggcttattgctcatctctggtggccgcatgggtgatgtcggc
aaaagcctgatccgtggcaatagcgtgctggttgatcagtgcgtcgcattttacgaagaa
cacttcccggatcgtttctatctggaactgatccgtaccggtcgtcctgatgaggaaagc
tacctgcatgcggcggtggcccttgcggaagagcgcggtttaccggtggttgcgactaac
gacgtgcgtttccttgaaccgggtgattttgatgcgcatgaaatccgcgtggcgattcac
gatggttttacgctcgacgatcccaaacgcccgcgcaattactcttcgcagcagtacatg
cgtaacgaagatgagatgtgtgagctgttcgcagacatcccggaagcgctggaaaatagc
gtagaaattgcccgtcgctgtaacgtcaccgttcgtttgggcgagtacttcctgcctcag
ttcccgaccggtgatatgaccacggaagatttcctggttgtgaaatcgaaagagggcctg
gaagaccgtctggaattcctgttcccggatcctgtaatccgcgcagaaaaacgtccacca
tatgacgaacgtctggatatcgaactccaggtgattaaccagatgggattccctggctac
ttccttatcgtaatggaatttatccagtggtcgaaggataacggcgtgccggttggccct
ggccgtggttccggtgcgggttcgcttgtggcctacgcgctaaaaattactgacctcgat
ccgcttgaatttgacctgctgttcgaacgtttccttaaccccgaacgtgtctcaatgccc
gactttgacgtcgacttctgcatggagaaacgcgatcaggtcattgagcacgtcgcggat
atgtatggccgtgatgcggtatcacaaattattaccttcggtacgatggcggcgaaagcc
gttatccgtgacgtgggtcgcgtgctgggccatccgtatggtttcgtcgatcgcatctct
aaactggtgccacccgatccgggcatgacgctggcgaaggccttcgaagcggaaccgcag
ctgccggaaatctacgaagctgacgaagaggtcaaagcgctgattgatatggcgcgcaag
ctggaaggtgtcacgcgtaacgccggtaagcacgccggtggtgtggttatcgcgccgacg
aaaattaccgattttgcgccgctgtattgcgacgaatcgggccagcatccggtcacccag
ttcgataaaaatgacgttgagtacgccggcctggtgaaattcgacttcctgggtttgcga
acgctcactatcatcgactgggcgttgaagatgatcaacccgcgccgggccaaacagggc
ctggagccgattgatatcgccgccattccgctcgatgacaagaaaagcttcgacatgctg
caacgctcggaaaccactgcggtgttccagctcgaatcgcgcggcatgaaagatctgatt
aagcgtctgcagcccgactgcttcgaagatatgatcgcactggtggctctgttccgtccg
ggcccgttacagtcagggatggttgataactttatcgaccgtaagcacggtcgcgaagaa
atttcctaccctgacgttcagtggcagcatgagtgcctgaaacctgttctggagccaacg
tacggtattatcctgtaccaggaacaggtcatgcagattgcccaggagctttccggctat
acccttggcggcgcggatatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgcggcacctttgaagagggcgcgaaaagccgtggcgtagacggtgagctg
gcgatgaaaatcttcgacctggtggagaaattcgccggttatggatttaacaaatcgcac
tccgctgcttatgcgttggtttcgtatcaaaccctgtggctgaaagcgcactatccggca
gaatttatggcggcggtaatgaccgctgatatggataacaccgagaaagtggttggcctg
gtcgatgaatgctggcgtatggggctgaaaatcttgccgccggatattaacgccgggatg
taccatttccacgtcaacgacgacggtgaaatagtttacggtatcggtgctatcaaaggc
gtgggcgaaggcccaatcgaagcgatcatcgaagcgcgtaacaatggcggttatttccgc
gaactgtttgatctttgcgcccggactgacaccaaaaaactgaaccgtcgagtactggaa
aaactgattatgtccggggcgtttgaccgcctcggcccgcatcgcgcggcgctgatgaac
tccctcggtgacgcgctgaaagcggctgaccagcacgcgaaagcggaagcgattggtcag
gcagatatgtttggtgtgctggcggaagagcctgagcagattgagcagtcttatgccaac
tgtcagccgtggccagaacatacagtgctggaaggagagcgtgaaacgttaggcttgtac
ctgacggggcatccgatcaaccagtatctgaaagaaattgagcgctatgtcggaggctac
aggctaaaagacatgcatccgacggaacgtggtaaaatgaccacggcggcggggctcgtc
attgcggcgcgggttatggtcaccaagcgcggtaatcgcatcggcatctgtactctggat
gaccgttccgggcggctggaggtgatgttattcaccgaagcgctggaaaaataccagcat
ttgctggaaaacgaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggcgggcttaaaatgatggcccgtgaagtgatggatattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccatcgatcggggaccattccagtacatctctactatcag
agggcggatgcacgtgcgcgattgcgctttggtgcaacgtggcgtgtctctccgagcgat
cgtttactcaacgatctccgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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