Lelliottia jeotgali: LJPFL01_0940
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Entry
LJPFL01_0940 CDS
T05035
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lef
Lelliottia jeotgali
Brite
KEGG Orthology (KO) [BR:
lef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lef03400
]
LJPFL01_0940
DNA repair and recombination proteins [BR:
lef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LJPFL01_0940
Archaeal homologous recombinant proteins
LJPFL01_0940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
ATPgraspMvdD
Motif
Other DBs
NCBI-ProteinID:
ASV54303
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All DBs
Position
complement(1014983..1016233)
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AA seq
416 aa
AA seq
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MKCIIPFTLFCHGTVMRILHTSDWHLGQNFYSKSRAAEHEAFLNWLLETAQSQEVDAIIV
AGDIFDTGQPPSYARELYNRFVVNLQQTGCHLVIVAGNHDSVATLNESRDILAFLNTTVV
ANAGHAPQILKKRDGTPGAVLCPIPFLRPRDIVQSQAGLSGGEKQQHLLQAITDYYQQQY
VDACALRGDAALPVIATGHLTTVGASKSDAVREIYIGTLDAFPAQNFPPADYIALGHIHR
AQVIGGCEHIRYCGSPISLSFDETGKGKSVHLVSFSDGKLSAVETLVVPVTQPLAMLKGD
LNAIAAQLEQWRGVEQSPPVWLDIEISTDEYLHDMQRKIQTLTEDLPVEVLLVRRSREQR
EKILLSAQRETLSELKVEEVFERRLAQEDIDDAQRKRLNELFTHTLHALHDEENNA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtataatcccgttcactcttttttgccacggaactgttatgcgcatacttcac
acctcggactggcatctgggtcaaaatttttacagtaaaagtcgtgccgccgaacatgag
gctttcctgaactggctgctggagacagcgcagtcgcaggaggtggacgccatcatcgtc
gccggagacatttttgacaccgggcagccgccgagctatgcgcgagaactctacaaccgc
ttcgtggtgaatttgcagcagacgggctgccatctggtgatcgtcgcgggcaaccacgat
tccgtcgccacgctcaacgaatcccgcgacattctcgcgtttctgaataccactgtagtg
gctaacgcaggacatgccccacaaatcctgaaaaaacgcgatggcaccccgggcgccgtg
ctttgccctattccttttttgcgcccgcgcgatattgtccagagccaggccgggctgtcc
ggcggcgaaaaacagcagcatctgttacaggcgatcaccgattattatcagcaacaatac
gtggatgcctgcgcgctgcgcggcgacgcggcgctgcccgtcatcgctaccgggcatctg
accaccgtcggcgccagcaaaagtgacgcggtgcgcgagatttacatcggtacgctggac
gccttcccggcgcaaaatttcccccctgccgattacatcgctcttggacatattcaccgc
gcacaggtgattggcggctgcgagcacattcgctactgcggctcgccgatctccctcagc
tttgatgaaaccggaaaaggcaaaagcgtccatctggtgagctttagcgacggcaaactg
agcgccgtcgagactctggtcgttccagtcacgcaaccgctggcgatgcttaagggcgat
ttgaacgccatcgccgcgcagcttgagcagtggcgcggcgtagagcagtccccgcccgtg
tggctggatatcgaaatcagcaccgatgaatatctgcatgacatgcagcgcaaaatccag
acactgaccgaagacctgcccgtagaagtgttgctggtgcgccgcagccgcgaacagcgc
gagaaaattctgttaagcgcccagcgcgaaacactcagcgagttaaaagtcgaggaggtg
ttcgaacgtcgcctggcacaggaagatattgatgatgcgcagcgcaaacgcctcaatgaa
ctgttcacccataccctgcacgcgctgcatgacgaggaaaataacgcatga
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