Lelliottia jeotgali: LJPFL01_1034
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Entry
LJPFL01_1034 CDS
T05035
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lef
Lelliottia jeotgali
Pathway
lef03030
DNA replication
lef03430
Mismatch repair
lef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LJPFL01_1034
03430 Mismatch repair
LJPFL01_1034
03440 Homologous recombination
LJPFL01_1034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lef03032
]
LJPFL01_1034
03400 DNA repair and recombination proteins [BR:
lef03400
]
LJPFL01_1034
Enzymes [BR:
lef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LJPFL01_1034
DNA replication proteins [BR:
lef03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LJPFL01_1034
DNA repair and recombination proteins [BR:
lef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LJPFL01_1034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_tau_4
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_18
AAA_16
ResIII
AAA_2
AAA_14
AAA_30
AAA_7
AAA_assoc_2
PIF1
TsaE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ASV54397
LinkDB
All DBs
Position
1118449..1120377
Genome browser
AA seq
642 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPSHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
DQIRTQLEHILDEEKIVHEPRALQLLARAADGSLRDALSLTDQAIASGDGQLSTEAVSTM
LGTLDDDQALSLIEAIIEANGERAMSLVNVAASRGVEWETLLVEMLALLHRVAMLQLSPS
AIGADMAMIEQRMRELARTVPPADVQLYYQTLLIGRKELPFAPDRRMGVEMTLLRALAFH
PRMPLPEPEVPCQSYAPAAPTAVMTPTAMPQHSAPPPGPDVPLPDATSSVLAARSQLQRA
QGATKPKKSEPAAPGRARPVNNAALERLASVTERVQSRPSPSALEQKAPAKKEAYRWKST
NTAEAVKVEVATPKALKKALEHDKTPELSAKLAAESLERDAWAAEVSQLTLPKLVEQVAL
NAWKEQDGHQIRLHLRPGQRHLNSASAQQVLAEALSTLQGAPVELTIIEDDNPAMRTPLE
WRQAIYEEKLAQARESIIADNNIQTLRRFFDADLDEESIRPI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtgttagcccgaaagtggcgaccccaaacctttgctgacgttgtcggc
caggaacatgtgctgaccgccctggcgaatggtttatcgctaggacgcatccatcacgcg
tatcttttctccggcacgcgcggcgtcggtaaaacctctattgcccgtttgctggcaaaa
ggcctgaactgcgaaaccgggatcaccgctacgccatgcggcgtgtgtgataactgccgg
gaaatcgagcaggggcgttttgtcgatctgatcgaaatcgatgccgcctcgcgcaccaaa
gtcgaagatacgcgcgacctgctggacaacgtgcagtacgccccggcgcgtggtcgcttc
aaggtctatctgatcgatgaagtccacatgctgtcgcgccacagttttaacgctctgctg
aaaacactggaagagccaccatcgcacgtcaaattcctgctggcgaccaccgatccgcaa
aagctgccggtcacgatcctgtcgcgctgtttgcagttccatctgaaggcgctggacgtc
gatcagattcgcactcagctcgaacacattcttgatgaagaaaagatcgtccacgaaccg
cgcgctctgcaactgctggcgcgagcggcggacggcagcctgcgtgacgcattaagtctg
accgatcaggcgattgccagcggtgacggccagctgtcgaccgaagcggtgagcaccatg
ctcggcacgctcgacgacgatcaggccctgtcgctgattgaagcgatcattgaggccaac
ggtgaacgcgccatgtcactggtgaacgttgcggcgtctcgcggcgtcgagtgggaaacg
ctgctggtcgaaatgctggcgctgctgcatcgcgtggcgatgctgcaactttccccgtcg
gccattggcgcggatatggcgatgattgaacagcggatgcgtgaactggcgcgtaccgtt
ccgcccgctgatgtgcagctttattaccagacgttgctgattggtcgtaaagaattaccg
tttgcgccggaccgccgaatgggcgtcgagatgacgcttctccgcgccctggcgttccat
ccgcggatgccgttgcctgagccagaagtgccgtgccagtcttatgctcctgctgccccg
acggcggtcatgacgcctacggcgatgccgcaacactctgcaccgccgcctgggcctgac
gtaccgctgccggatgccaccagttcggtgctcgccgcccgtagccagctacagcgcgcg
cagggagcaaccaaaccaaaaaagagtgaaccggcagcgccaggaagagcgcggccggtt
aacaacgccgccctcgaacgactggcatcggtaacggagcgcgttcagtcgcgcccatcg
ccgtcggcgctcgaacagaaagccccggcgaagaaagaggcttaccgctggaagtcgacc
aacaccgccgaagcagtgaaggtggaagtggcgacgccgaaagcgctcaaaaaggcgctg
gagcatgataaaacgccggaactgtccgcgaagctggcggcagaatccctcgagcgggat
gcctgggccgctgaagtcagccagttaacgctgccgaaactggtcgagcaggttgcgctg
aatgcctggaaagagcaggacggacatcaaattcgtctgcatttacgtccgggccagcgt
caccttaattctgccagtgcacagcaggtgctggctgaggcgctgtccacattacagggc
gcgccggttgaattgactatcattgaagatgataatccagcaatgcgcacgccactggag
tggcgtcaggccatttatgaagagaagctcgcgcaggcgcgcgagtcgattattgcggat
aataacatccagaccctgcgccgtttcttcgacgccgatctggatgaagagagtatccgt
cccatttga
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