Lelliottia jeotgali: LJPFL01_2849
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Entry
LJPFL01_2849 CDS
T05035
Name
(GenBank) ATP-dependent RNA helicase YejH
KO
K19789
DNA repair protein RadD
Organism
lef
Lelliottia jeotgali
Brite
KEGG Orthology (KO) [BR:
lef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lef03400
]
LJPFL01_2849
DNA repair and recombination proteins [BR:
lef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
LJPFL01_2849
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
AAA
SLFN-g3_helicase
zf-tcix
AAA_22
AAA_16
DZR
TniB
DUF7577
UPF0547
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
ASV56212
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Position
3034185..3035945
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AA seq
586 aa
AA seq
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MTFTLRPYQQEAVDATLAWFRKHTDPAAIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYCALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLPHFRSEFSLLIVDECH
RISDDDQSQYQQILNHLKEVNPQVRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADMNQELKKQQRITPH
IISQIEEFAQTRKGVMIFAATVEHAREVTGLLPANDAALITGETPGPERDKLIDAFKAQQ
FRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYSPEVGTPKGKSGNVPVQVFCPGCGFANTFWGKTTADGTLIEHFGRRCQGWFEDDEG
HREQCDYRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALKLKDALVLRCSGMA
LQTGADEKGEWLKITYYDEDGADVSERFRLHTPAQRMAFEQLFIRPHTRTPGVPLRWITA
ADIVHHQALLRQPDFVVARKKGQFWQVREKVFDYEGRFRRANELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacttttacacttcgcccctatcagcaggaagccgttgacgccaccttagcctggttt
cgcaaacacacagatcctgccgccatcgtcctgcccaccggggcgggtaaaagcctggtg
atagccgaactggcgcgactggcgcgtggccgcgtgctggtgctggctcacgtcaaagag
ctggtggcgcaaaaccacgccaaatactgcgcgctgggtctggaggccgatatcttcgct
gccgggctgaagcgtaaagagagccacggcaaagtggtattcggtagcgtgcagtcggtg
gcgcgaaatctgccgcattttcgcagcgaattctcgctattgattgtcgatgagtgccat
cgcatcagcgatgacgaccaaagccagtatcagcaaatcctcaaccacctgaaagaggtg
aacccgcaggtgcgtctgcttgggctgaccgccacaccgtttcgccttggcaaagggtgg
atttatcagttccactatcacggcatggtgcgcggtgacgaaaaagcgctgttccgcgac
tgcatctatgaactgccgctgcgctacatgatcaaacatggctaccttacgccgcctgag
cgtcttgatatgcccgtcgttcagtatgatttcagccggttgcaggcccagagtaacggt
ctgttcagcgaggcggacatgaatcaggagctgaaaaaacagcagcgcatcacgccgcac
atcatcagtcagattgaggagttcgcccagacccgcaaaggggtgatgattttcgcggct
accgtcgaacatgccagggaagtgaccggcctgctccctgctaacgacgcggcgctgatc
accggcgaaacaccgggacctgagcgcgacaagctcattgacgcgtttaaggcgcagcag
ttccgctatctggtcaacgtttcggtactgaccaccggctttgacgccccacacgtcgat
ttgattgccattttgcgcccaaccgaatccgtcagcctgtatcagcagattgtcgggcgt
gggctacggctggctcccggcaagaccgactgcctgattctggattacgccgggaatccg
cacgatctctattcgcccgaggtaggtacgccaaaaggcaaaagcggtaacgttccggtg
caggtattttgtccaggatgcggtttcgccaatactttctgggggaaaaccaccgccgac
ggcacgctgattgaacattttggccgccgctgtcagggctggtttgaagatgacgaaggc
catcgcgagcagtgcgattatcgcttccgctttaaaaattgtccgcaatgtaacgctgaa
aatgacatcgcagcgcggcgctgtcgcgagtgcgatacggtgctggtcgaccccgatgat
atgcttaaagccgcgctgaaactcaaagacgcgctggtgctgcgctgctccggcatggca
ctgcaaaccggtgccgacgagaaaggcgaatggctgaaaatcacctactacgatgaagat
ggcgcagacgtcagcgaacgtttccgtctgcatacacccgcccagcgcatggcctttgag
cagctctttatacgcccgcacacccgcacgccgggggtgcctctgcgctggatcaccgcc
gctgatatcgttcatcatcaggcgctgttgcgtcagcctgattttgttgtcgcacgtaaa
aaaggccagttctggcaggtgcgcgaaaaggtgttcgattacgaaggacgcttccgccgg
gccaatgaattgcgcggttaa
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