Lelliottia jeotgali: LJPFL01_3108
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Entry
LJPFL01_3108 CDS
T05035
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lef
Lelliottia jeotgali
Pathway
lef03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lef00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LJPFL01_3108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lef03019
]
LJPFL01_3108
03009 Ribosome biogenesis [BR:
lef03009
]
LJPFL01_3108
03036 Chromosome and associated proteins [BR:
lef03036
]
LJPFL01_3108
Enzymes [BR:
lef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LJPFL01_3108
Messenger RNA biogenesis [BR:
lef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LJPFL01_3108
Ribosome biogenesis [BR:
lef03009
]
Eukaryotic type
90S particles
RNase
LJPFL01_3108
Prokaryotic type
rRNA processing factors
LJPFL01_3108
Chromosome and associated proteins [BR:
lef03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LJPFL01_3108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ASV56471
LinkDB
All DBs
Position
complement(3329925..3330689)
Genome browser
AA seq
254 aa
AA seq
DB search
MPRHTKPRWLYQVGFVCCIFDAFIYWYRMNPIVINRLQRKLGYTFQHQELLQQALTHRSA
SSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAEIAREFELGE
CLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEQLILNWYQTRLDEISPGDK
QKDPKTRLQEYLQGRHLPLPSYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAE
QAAAEQALKMLELE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
gtgccacggcacacgaaaccgcgttggttgtatcaggtcggtttcgtgtgctgcattttt
gacgcattcatttactggtatcgcatgaaccccatcgtaattaatcggcttcaacggaag
ctgggctacacttttcagcatcaggagttgttgcaacaggcattaacccaccgcagtgcc
agcagcaaacacaatgagcgcctcgagtttttaggcgactccattttaagttacgtgatc
gccaatgcgctttatcaccgcttccctcgtgtggatgaaggtgatatgagccgtatgcgc
gccacgctggtacgcggcaatacgcttgccgagattgcacgcgagtttgagctgggtgaa
tgcctgcgactcgggccgggtgaactgaaaagcggtggttttcgccgtgaatctattctc
gcggacactgtcgaagcattaatcggcggtgttttcctcgacagcgatattcagacggtt
gaacaactcattctgaactggtaccaaacgcgtctggacgaaattagtccgggcgataaa
caaaaagatccgaagactcgtttgcaggaatacctgcagggtcgccaccttcctctgcca
tcttatctggtggtgcaggtacgcggcgaagcacacgatcaggaatttaccatccattgc
caggttagcggcctgagtgaaccggtggttggcacaggttcaagccgtcgcaaggctgaa
caggctgccgccgaacaggcgttaaaaatgctggagctggaatga
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