Lelliottia jeotgali: LJPFL01_3120
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Entry
LJPFL01_3120 CDS
T05035
Name
(GenBank) putative tRNA-rRNA methyltransferase yfiF
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
lef
Lelliottia jeotgali
Brite
KEGG Orthology (KO) [BR:
lef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lef03009
]
LJPFL01_3120
03016 Transfer RNA biogenesis [BR:
lef03016
]
LJPFL01_3120
Ribosome biogenesis [BR:
lef03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LJPFL01_3120
Transfer RNA biogenesis [BR:
lef03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
LJPFL01_3120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ASV56483
LinkDB
All DBs
Position
complement(3342212..3343309)
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AA seq
365 aa
AA seq
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MNDELKNKSGKVKVMYVRSDDDSDKRTQNPRTGKGGGRPGPSRADGGRRPARDDRNNRGD
DRKRDDRKPGDRRRDDRPRDDFPRDASPWRTVSRAPGEEAPAKADHGGISGKSFIDPEVL
RRQRAEETRVYGENACQALFQSRPECIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDDA
ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQADADDCVLALEDVGNPHNLGAIMRSCAH
FGVKGVLLQDAAVVESGAAIRTAEGGAEHVQPITGESVLDAIEEFRKAGYSIVTTSSHKG
TPLFEATLPRKMVLVLGQERDGLSDAALSSADLSVSIAGTGKVESLNVSVATGVLLAEWW
RQNKA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgaactgaagaataaaagcggcaaggtcaaagtgatgtatgtccgcagtgat
gatgattctgacaaacgcacccaaaatccgcgtaccggaaagggtggggggcgtccgggt
ccatctcgtgcagacggtggccgtcgccccgcccgcgatgacagaaataaccgtggtgat
gaccgcaaacgtgatgaccgcaagccgggcgatcgccgccgcgacgaccgtccacgtgat
gatttcccacgtgatgcctcaccgtggcgtaccgtttcccgcgcaccgggtgaagaagca
ccggcaaaagccgatcacggcggaattagtggtaagagctttatcgatccggaagttctg
cgccgtcaacgcgcagaagaaacccgagtctatggcgagaatgcctgccaggccctgttc
cagagccgtccggaatgtatcgttcgcgcctggtttatccagagcgttacgccgcgtttc
aaagaagcactgcgctggatggcggcaaaccgcaaagcctaccatgtggtagatgatgct
gagctgaccaaagcatccggtaccgagcatcacggtggcgtttgcttcctgatcaaaaaa
cgtaatggcacgaccgtccagcaatgggttagtcaggctgatgccgacgattgcgtgctg
gcgctggaagatgtgggcaaccctcacaatctgggtgcgatcatgcgtagctgcgcacat
ttcggtgtgaaaggcgtgttgttgcaggatgcggcggttgtcgaatccggtgcggcgatt
cgtactgccgaaggtggtgcggagcacgtacagcctattacgggcgaaagcgttctggat
gccatcgaagagttccgcaaagcgggctactctatcgtgacaacctccagccataaaggt
acgccgctgttcgaagcgacactaccgcgcaaaatggtgctggtgctgggtcaggaacgt
gacggactgtctgatgcggcgctctcttctgccgatctgagcgtttccatcgcgggtact
ggcaaagtagaaagcctcaacgtttccgttgcaactggcgtcctgctggctgaatggtgg
cgtcagaacaaagcataa
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